Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02953 ATGGACACACACATGCTCTCTTGTGAGCATCTTACTTCTGCGGTTGATGGAGATGATGATTCTTTGAACATATTCACTTCATATAAAACGCAGGGTGGACATGGAAGCATAAAGGCTAGTCCTAGACTTGAAGTTGCAGCAGCTTCTTCATTGGGTCGCCAAAGGCACGCGTTGCCTCTACTTTGGTTGATTAAAGAAGCAATTGACTCAAGATTGAGCTTTTTGCAGAAGCATGCCAAGGCACAACGTGTGGGCCTGAGATTGTGCTTAAGTTGCTTGGATTGCATGTCACTCACAACTTCACTTGGTTGGTTGTTGTGGCCACCCAAGCTTAGTGACATAGCAAAGGAAGAGCGTGTGGGACTAATGATGTTGAGTGGGAATTATGACATTGTTTCAACAGGAAGAAACGTAGCTCCAAAAAGAAAATTTAGGGTTTCGTGCGTTTCTGAAAAGCTTATGTTGGGTGGTGCACTTTCAACCCCAACAACTCAAAGCCTCAAAGCAGCAAGAACAATTGCAATGCTCTATCCAACTCATAGATTATTGTCTCTTAAGAACCCAGTGGCAAATACCAGAGGATTTTCGTCAAAAGAGAGTATTTTTATCAGGGGTCACCAAATCAATATAAAACAATTTTTTGGGCTTATCTCGGGTCGTGCTCCACGAAACAAAGCAGGATTTGTTGTTTCCCCAAGGTGTGGCCTGCCACTGACACAAGAGAATGTGGAGAAGGTTTTGGATGAGGTGAGGCCTGGCTTGATGGCTGATGGAGGGAATGTGGCATTACATGAGATAGATGGTCTTGTTGTTGTCCTCAAGCTACAAGGGGCATGTGGATCATGTCCTAGCTCAACTATGACATTGAAAATGGGAATAGAAACTCGCCTCAGGGATAAGATTCCAGAAATCATGGAAGTGGAGCAGATAATGGACACTGAGACCGGTCTCGAGTTAACTGAAGAAAATGTAGAAAAAGTTCTTTCTGAAATTAGACCATACCTAGTTGGCACTGGGGGAGGAATATTAGAGCTTGTTCAGATAAAAGATTATGCTGTCAAAGTTCGGTTAAGTGGACCTGCAGCTGGGGTTATGACAGTTCGTGTTGCATTAACACAGAAGCTGAGAGACAAGATACCTTATATTGCAACTGTGCAACTAATAGACTAA 1170 0.4316 MDTHMLSCEHLTSAVDGDDDSLNIFTSYKTQGGHGSIKASPRLEVAAASSLGRQRHALPLLWLIKEAIDSRLSFLQKHAKAQRVGLRLCLSCLDCMSLTTSLGWLLWPPKLSDIAKEERVGLMMLSGNYDIVSTGRNVAPKRKFRVSCVSEKLMLGGALSTPTTQSLKAARTIAMLYPTHRLLSLKNPVANTRGFSSKESIFIRGHQINIKQFFGLISGRAPRNKAGFVVSPRCGLPLTQENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEIMEVEQIMDTETGLELTEENVEKVLSEIRPYLVGTGGGILELVQIKDYAVKVRLSGPAAGVMTVRVALTQKLRDKIPYIATVQLID 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02953 389 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 235 387 - -
Spst9g02953 389 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 318 388 IPR034904 -
Spst9g02953 389 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 240 314 IPR034904 -
Spst9g02953 389 Pfam NifU-like domain 324 386 IPR001075 GO:0005506|GO:0016226|GO:0051536
Spst9g02953 389 Pfam NifU-like domain 243 308 IPR001075 GO:0005506|GO:0016226|GO:0051536
Spst9g02953 389 Gene3D - 318 389 IPR034904 -
Spst9g02953 389 Gene3D - 234 317 IPR034904 -
Spst9g02953 389 FunFam NifU-like protein 3, chloroplastic 235 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02953 Spst-Chr9 63664432 63675360 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02953 - - gmx:100806364 428.328