Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02935 ATGGCTTTTGCACATGAACAATTGCATCTTCTTTTGTTGTTAACCTTTTCAACATGTTGTTTCTCATCAGCTAGCACCATTTCATCTGTTAAACCTCAGAGACTGGTCTCCAAACTCATTCACCCTAACTCAGTTCATCATCCCCACTACAAGCCACATGAAACCGCCAAAGACCGAATGAAACTTGATATCCAACACTCAGCAGCACGTTTAGCATACATACAAGCAAGGATAGAAGGTTCTTTGGTCTCTAAAAATGACCACAAAGCTAGTGTTTCTCCCTCCTTAACTGGTAGAACTATATTGGCCAACATCTCAATAGGCCAACCCCCTATCCCACAACTAGTTGTTATAGACACTGCCAGTGACACCTTATGGGTCATGTGCTCCCCTTGCACAAACTGCGACAACCATTTAGGTCCACTCTTTGACCCCTCAAAGTCTTCCACCTTTTTCCCACAATGCAAAATACCTTGTGGCTTCAAGGGTTGTAAATGTGACCCTATTCCATTTAGTGTCACTTATGCAGATAGCTCCTCCGCTGCAGGAACATTTGGTCGTGACACTGTTATCTTTGAGACAACTGATGAAGGTACCTCTCAGATATTTGACGTACTATTTGGATGTGGCCACAACATTGGATACAATTCAGATCCAGGGCACAATGGAATACTTGGACTAAACAATGCAGCTGGATCTTTGGCAACAAAAATTGGCCAAAGGTTCTCTTACTGCATAGGCAACCTGGCTGACCCTTATTATACTTACAACCAATTGATATTAGGTGAAGGGGCAGATCTTGAAGGTTTTTCCACCCCTTTTGAAGTCCGCAATGGATTTTATTATATCACCATGGAAGGCATAAGTGTAGGGGAAAAAAGGCTTGACATAGCTCCAGGAACTTTTGATATTAAAGAGAATGGCTCAGGTGGAGTCATCATTGACACAGGGAGCACTATCACCTACCTAGTTGATGATGTGCATAAACTGATATACAAAGAAGTTAGAAATATCATTGGTTGGTCCTTTAGAGGAGCTACAATTGAAAATTCCCCATGGATGTTGTGCTATTATGGCAGTATCAGTAGAGATCTAGCTGGGTTTCCAGTTGTTACATTCCATTTTGCTGATGGAGCAGATTTGACTATGGATTCAGGAAGCTTTTTTAATCAAGTCAGTAATGACATATTTTGCATGACTATTGGTCCAGCCAGTAACATTGACATTAAAAGTAAGCCTTCAGTCATTGGATTGGTAGCCCAGCAGAGTTACAACGTGGGATATGACCTTGTCAATCATTTTGTTTACTTCCAAAGAATTGATTGTGAACTTCTTAGTGGTTGA 1344 0.4122 MAFAHEQLHLLLLLTFSTCCFSSASTISSVKPQRLVSKLIHPNSVHHPHYKPHETAKDRMKLDIQHSAARLAYIQARIEGSLVSKNDHKASVSPSLTGRTILANISIGQPPIPQLVVIDTASDTLWVMCSPCTNCDNHLGPLFDPSKSSTFFPQCKIPCGFKGCKCDPIPFSVTYADSSSAAGTFGRDTVIFETTDEGTSQIFDVLFGCGHNIGYNSDPGHNGILGLNNAAGSLATKIGQRFSYCIGNLADPYYTYNQLILGEGADLEGFSTPFEVRNGFYYITMEGISVGEKRLDIAPGTFDIKENGSGGVIIDTGSTITYLVDDVHKLIYKEVRNIIGWSFRGATIENSPWMLCYYGSISRDLAGFPVVTFHFADGADLTMDSGSFFNQVSNDIFCMTIGPASNIDIKSKPSVIGLVAQQSYNVGYDLVNHFVYFQRIDCELLSG 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02935 447 CDD pepsin_A_like_plant 102 442 IPR034161 -
Spst9g02935 447 FunFam Aspartyl protease family protein 265 444 - -
Spst9g02935 447 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 312 323 IPR001969 GO:0004190|GO:0006508
Spst9g02935 447 Gene3D Acid Proteases 268 445 IPR021109 -
Spst9g02935 447 PANTHER OS07G0603500 PROTEIN-RELATED 38 442 - -
Spst9g02935 447 ProSiteProfiles Peptidase family A1 domain profile. 101 438 IPR033121 -
Spst9g02935 447 SUPERFAMILY Acid proteases 102 442 IPR021109 -
Spst9g02935 447 Gene3D Acid Proteases 84 254 IPR021109 -
Spst9g02935 447 FunFam Aspartyl protease family protein 81 262 - -
Spst9g02935 447 Pfam Xylanase inhibitor C-terminal 281 438 IPR032799 -
Spst9g02935 447 Pfam Xylanase inhibitor N-terminal 103 248 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02935 Spst-Chr9 63425127 63426470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02935 105 445 Miscellaneous Gene Families AT1G77480 22.849 7.48e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02935 - - vum:124821182 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02935 9 63425127 63426470 Spst9g02935 9 63425127 63426470 ECH