Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02928 ATGGATTCGGACACTGAGACAGCAAAATCCAAACGTTCCAAAAAGGAGAAGGAGAAGAATAAGAAGAACAAGAAGAAAAAGGATGTTGCCTCTCAGCCAGATGGAGATGGAGTTGAGGTTGAGGTGGAGGTTGTCCATGAACATCCCAATAAAACACCTCCTGTTGTTGGTTATTTCCCTTCGGGCTTTGATCCGGTAAAGAATCATGCCAATGGTGCCGGTCCCTCTGATTTTCAAGTTTACCGGCACAGGAACATGTCCAAGAGGATGCAGCTTGTAGTTCGCCCTCCCGGGTCTTCCGTGGAATTTGTTGGAACAAGTTTTTCTGGCGAGGCCGCGGCTGGACACCGAGCCATGTTCGCTCTTGGAGTCCTTGACAAGGAAGCTGGGACCCTGAAGATTGTGCCCATTGCTGGCAATAAGATATTCAGATTGGAGCCAAAGGTTAAAGGTGTGGATGTTGCTGACAATGAGCCAGCAAACTCAACTTTGGAAGAGATGACTCCACAGCAGAAGTTTGCGGAGACTACTGCTATATGGGGAACAAAGAGGGATATCGAGAAGGCTAAAAAGAAGCTAGCTCTCAAACAAGATGAAAATCCTGATTCTCAAAGGAATCTGGATGTGAAAATGAAAAATGTTTCAGTAAACAAAAAGGCTCTTGAAAGTACAGAATCTCATGTTTCTCGCAATATACCACCATATGATACTTCTGCAACTACACCTCAGGGTGCATATTTATTGGATAAAATCATCCTTAAAGGAGAATGGGATTATCTTGATGACCTTTATGATAGGTTGCATCGGGAAGAAGAAGCAGACTTCAGTGCTTATCCAACATTTATTCGCAACAGGATAGAGAAATTAAGGAAAATTGAGGATGAGTCAGAAAAGAAGAAACTTTCCTGCATATTCTCATACATCAATCATCTTATAAAGTTCAAAGATCAGCATTCCTTTGACGTTTTCTCTGCAAAGGGCCATAAAATCCCCAACATCCTGCGCCATAAATTTGCAAATATGTTTGCTGTTTCTGAATTAAAAAGGCTACCCCCTGAAAAGATTTCTCTTCTCATATGTTACGTCTTGGTGCTTACGCTTTTCGCTGATGACTTCCTAACTGACTGCATAGATATAGCAAAGGATCTGAGCATGAGTGTAATGGCCGTGAGACAACTCTATGAGCACTTGGGTTGCAAATTTACCCGCAAGAAGAACACTTTCAACGGTTGGTGTGCTACGCTTCCTGTCCCTCTTAAATTTCCTGAGCTTAGGCAAAGGAAGAGGAAAAGGTAG 1296 0.4282 MDSDTETAKSKRSKKEKEKNKKNKKKKDVASQPDGDGVEVEVEVVHEHPNKTPPVVGYFPSGFDPVKNHANGAGPSDFQVYRHRNMSKRMQLVVRPPGSSVEFVGTSFSGEAAAGHRAMFALGVLDKEAGTLKIVPIAGNKIFRLEPKVKGVDVADNEPANSTLEEMTPQQKFAETTAIWGTKRDIEKAKKKLALKQDENPDSQRNLDVKMKNVSVNKKALESTESHVSRNIPPYDTSATTPQGAYLLDKIILKGEWDYLDDLYDRLHREEEADFSAYPTFIRNRIEKLRKIEDESEKKKLSCIFSYINHLIKFKDQHSFDVFSAKGHKIPNILRHKFANMFAVSELKRLPPEKISLLICYVLVLTLFADDFLTDCIDIAKDLSMSVMAVRQLYEHLGCKFTRKKNTFNGWCATLPVPLKFPELRQRKRKR 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02928 431 Pfam A49-like RNA polymerase I associated factor 77 422 IPR009668 GO:0003677|GO:0006351
Spst9g02928 431 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 39 431 IPR009668 GO:0003677|GO:0006351
Spst9g02928 431 Coils Coil 186 206 - -
Spst9g02928 431 Coils Coil 8 28 - -
Spst9g02928 431 MobiDBLite consensus disorder prediction 23 40 - -
Spst9g02928 431 MobiDBLite consensus disorder prediction 1 40 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02928 K03005 - gmx:100812427 671.003