Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02881 ATGAGGAGTCGTGTACCATACGAACTCAAGGCTCTTGCAGAGAAGCATGAACCCACTCCTTTGAGGTGGGGCCCACATATTCCAAATGTTGAGTTTTTGGAAGATTACAGATTGAGGGTGACAAGATTTCAAAACTATTCTATTAGGACTTTAAATGAGCAAACAGGAGTGAAGGAAAGAGAGAAGCACACCATTGTTGGTTTGAGATACATAGCAGAGAGTTCAATGGGGAAGGGAGAGTTTCATGGGGTGGTCTTGATGCTGCTGTTTTTGTGGGTTTGTGGTGTCACAGCCTCTGTGACTTATGACCACAAAGCCATTGTGATCGATGGAAAGAGGAGAATTTTATTGTCTGGCTCCATTCACTACCCAAGAAGCACACCTCAAATGTGGCCAGACCTTATTCAAAAGGCCAAAGATGGAGGCCTTGATGTCATTCAGACCTATGTTTTTTGGAATGGTCATGAACCTTCTCCTGGAAAAGTAATGCAAATACATTTCCTTATGGCTCTTAGCAGTTCCATTCTTTCTCAAACCACAGTTCGAATTCTTGTTTACTATTTCGAAGATAGGTTTGACTTGGTTAAGTTCGTGAAGCTAGTGCAGCAAGCAGGCCTCTATGTTCATCTCCGCATTGGTCCCTACGTATGTGCTGAATGGAACTTGGGGGGATTTCCTGTCTGGCTCAAGTATGTTCCTGGAATTGCTTTCAGAACGGACAACGAACCGTTCAAGGCTGCAATGCAAAAGTTCACAGCGAAAATTGTTAGCTTGATGAAAGAAGAGAAGTTGTTTCAATCTCAGGGTGGTCCAATAATCATGTCACAGATTGAAAACGAGTATGGACCAGTGGAATGGGAAATTGGTGCCCCTGGAAAAGCATATACGAAATGGGCTGCTCAAATGGCTGTTGGTCTAGACACTGGTGTTCCATGGGTTATGTGCAAGCAAGAAGATGCTCCTGATCCTGTTATTGACACCTGCAATGGGTTCTACTGTGAAAACTTCAAGCCCAACAAGAACACCAAACCCAAAATGTGGACCGAGAATTGGACTGGCTGGTACACTGATTTTGGTGGTGCAGTCCCTGTTAGACCAGCGGAAGACTTGGCATTCTCGGTTGCAAGATTCATACAAAATGGTGGTTCGTTCGTTAACTACTATATGTACCATGGAGGAACTAACTTTGGTCGGACATCTAGTGGTCTCTTCATTGCCACCAGCTATGACTATGACGCACCCCTTGATGAATACGGACTTCAAAATGAACCAAAATGGGGGCATTTGAGAGATTTGCATAAGGCAATAAAACAAAGTGAGCCTGCTTTAGTGTCTACAGATCCTAAAGTGCAATCGCTTGGATATAACCTTGAGGTAAAGTCCCTAAGTTGGTCTGTGATGAAACCCAACAGAATTGCCTGTGCGTTGAAAGCACATGTGTTCTCCACCCCTGGTGCCTGTGCGGCATTCATTGCAAATTATGACACCAAATCTTCTGCAAAAGCTACATTTGGTAGTGGACAATATGATCTACCACCTTGGTCTATCAGTATTCTTCCTGACTGCAAAACTGAAGTTTACAACACCGCAAAGGTTGGTGTCAACAGCTGGCTGAAAAAGATGACTCCGGTAAACGGTGCATTTGCTTGGGAGTCGTTCAATGAAGAACCTTCCTCATCAAGTCAAATTGATTCCATTGCAGCAGAGGCACTTTGGGAACAGGTCAATGTGACCCGGGATTCTTCAGATTATTTGTGGTATATGACAGATGTCTACATTAATGCTAATGAAGGTTTTTTAAAGAATGGACAATCTCCTGTTCTCACTGTAATGTCAGCAGGGCATGTGCTACATGTTTTCATTAATGGTCAATTTTCAGGAACTGTGTATGGGGGATTGGGGAATCCTAAATTAACATTTAGTGACAATGTGAACCTGAGGGTTGGCAACAACAAGCTCTCATTACTCAGTGTTGCGGTTGGTCTCCCGAATGTTGGTTTGCACTTTGAAACATGGAATGCGGGGGTGTTAGGCCCAGTCACTCTGAAGGGTCTAAATGAGGGGACACGAGACTTGTCTAAGCAGAAATGGTCTTACAAGGTTGGACTGAAAGGTGAAGCCTTGAACCTTCACACTGAAAGTGGGAGTAGCTCTGTTGAATGGACACGAGGATCATTAGTGGCTAAAAAACAACCTTTGACATGGTACAAGGCAACTTTTAGTGCCCCAGCTGGCAATGATCCATTGGCTCTAGATATGGGTAGCATGGGAAAGGGTGAAGTATGGATCAATGGTCGCAGCATTGGTCGCCATTGGCCTGGATATATAGCACATGGTAGTTGTAATGCTTGCAACTACGCTGGATTTTATACTGATAAAAAGTGCAGGATTAATTGCGGAAAACCATCTCAAAGATGGTATCATGTTCCTCGCTCATGGCTGAACTCAGGTGGTAACTTCTTGGTTGTGTTTGAAGAATGGGGAGGTGATCCTAATGGAATTGCTTTGGTGAAAAGAACTTAA 2523 0.4376 MRSRVPYELKALAEKHEPTPLRWGPHIPNVEFLEDYRLRVTRFQNYSIRTLNEQTGVKEREKHTIVGLRYIAESSMGKGEFHGVVLMLLFLWVCGVTASVTYDHKAIVIDGKRRILLSGSIHYPRSTPQMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKVMQIHFLMALSSSILSQTTVRILVYYFEDRFDLVKFVKLVQQAGLYVHLRIGPYVCAEWNLGGFPVWLKYVPGIAFRTDNEPFKAAMQKFTAKIVSLMKEEKLFQSQGGPIIMSQIENEYGPVEWEIGAPGKAYTKWAAQMAVGLDTGVPWVMCKQEDAPDPVIDTCNGFYCENFKPNKNTKPKMWTENWTGWYTDFGGAVPVRPAEDLAFSVARFIQNGGSFVNYYMYHGGTNFGRTSSGLFIATSYDYDAPLDEYGLQNEPKWGHLRDLHKAIKQSEPALVSTDPKVQSLGYNLEVKSLSWSVMKPNRIACALKAHVFSTPGACAAFIANYDTKSSAKATFGSGQYDLPPWSISILPDCKTEVYNTAKVGVNSWLKKMTPVNGAFAWESFNEEPSSSSQIDSIAAEALWEQVNVTRDSSDYLWYMTDVYINANEGFLKNGQSPVLTVMSAGHVLHVFINGQFSGTVYGGLGNPKLTFSDNVNLRVGNNKLSLLSVAVGLPNVGLHFETWNAGVLGPVTLKGLNEGTRDLSKQKWSYKVGLKGEALNLHTESGSSSVEWTRGSLVAKKQPLTWYKATFSAPAGNDPLALDMGSMGKGEVWINGRSIGRHWPGYIAHGSCNACNYAGFYTDKKCRINCGKPSQRWYHVPRSWLNSGGNFLVVFEEWGGDPNGIALVKRT 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02881 840 Gene3D - 551 695 - -
Spst9g02881 840 Gene3D Glycosidases 94 441 - -
Spst9g02881 840 PRINTS Glycosyl hydrolase family 35 signature 758 774 IPR001944 GO:0004553|GO:0005975
Spst9g02881 840 PRINTS Glycosyl hydrolase family 35 signature 403 419 IPR001944 GO:0004553|GO:0005975
Spst9g02881 840 PRINTS Glycosyl hydrolase family 35 signature 346 361 IPR001944 GO:0004553|GO:0005975
Spst9g02881 840 PRINTS Glycosyl hydrolase family 35 signature 110 127 IPR001944 GO:0004553|GO:0005975
Spst9g02881 840 PRINTS Glycosyl hydrolase family 35 signature 131 149 IPR001944 GO:0004553|GO:0005975
Spst9g02881 840 PRINTS Glycosyl hydrolase family 35 signature 383 398 IPR001944 GO:0004553|GO:0005975
Spst9g02881 840 PRINTS Glycosyl hydrolase family 35 signature 731 745 IPR001944 GO:0004553|GO:0005975
Spst9g02881 840 FunFam Beta-galactosidase 95 439 - -
Spst9g02881 840 SUPERFAMILY (Trans)glycosidases 100 438 IPR017853 -
Spst9g02881 840 Pfam Beta-sandwich domain in beta galactosidase 475 532 IPR041392 -
Spst9g02881 840 Pfam Glycosyl hydrolases family 35 107 162 IPR031330 -
Spst9g02881 840 Pfam Glycosyl hydrolases family 35 186 435 IPR031330 -
Spst9g02881 840 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 269 281 IPR019801 GO:0004553|GO:0005975
Spst9g02881 840 FunFam Beta-galactosidase 704 840 - -
Spst9g02881 840 SUPERFAMILY Galactose-binding domain-like 696 835 IPR008979 -
Spst9g02881 840 PANTHER BETA-GALACTOSIDASE RELATED 92 839 IPR001944 GO:0004553|GO:0005975
Spst9g02881 840 SUPERFAMILY Galactose-binding domain-like 516 686 IPR008979 -
Spst9g02881 840 Gene3D - 702 840 - -
Spst9g02881 840 FunFam Beta-galactosidase 388 534 - -
Spst9g02881 840 FunFam Beta-galactosidase 559 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02881 Spst-Chr9 62956379 62970628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02881 85 839 Glycoside Hydrolase AT3G13750 67.942 0.0 1065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02881 - - gmx:100781959 1405.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02881 9 62956379 62970628 Spst9g02881 9 62956379 62970628 ECH
Spst3g03412 3 83944824 83949928 Spst9g02881 9 62956379 62970628 PCT