Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02864 ATGGTGGTGAGGATTCGGCTCTCGCGGTTCGGATGCAAGAACAAGCCCTTCTATCGAGTCATGGCCGCTGATAGCAGATCTCCCAGAGATGGCAAACACCTCGAAGTTCTCGGTTACTACAATCCCTTACCAGGTCAAGATGGTGGCAAGAGGATAGGTCTCAATTTCGAAAGGGTGAAGTATTGGCTTTCTGTTGGAGCTCAGCCTTCAGAGCCTGTGGAGCGGCTTCTATTCAGAGCTGGGGTACTGCCCCCACCGCCTATGGTGGCAATGGGGCGGAAAGGTGGACTGCGTGACACTCGCCCTGTTGATGCTCTTACTGGACGCGTGCTAAGGCAAGAGAATCCGGCTAATGATAAGAACAATGACCATGGACATGAGACTCCTGAAAATCCTTGTTAG 402 0.5224 MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRIGLNFERVKYWLSVGAQPSEPVERLLFRAGVLPPPPMVAMGRKGGLRDTRPVDALTGRVLRQENPANDKNNDHGHETPENPC 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02864 133 PANTHER 30S RIBOSOMAL PROTEIN S16 1 115 IPR000307 GO:0003735|GO:0005840|GO:0006412
Spst9g02864 133 Gene3D - 1 128 IPR023803 -
Spst9g02864 133 NCBIfam 30S ribosomal protein S16 3 82 IPR000307 GO:0003735|GO:0005840|GO:0006412
Spst9g02864 133 Hamap 30S ribosomal protein S16 [rpsP]. 2 80 IPR000307 GO:0003735|GO:0005840|GO:0006412
Spst9g02864 133 MobiDBLite consensus disorder prediction 90 133 - -
Spst9g02864 133 MobiDBLite consensus disorder prediction 116 133 - -
Spst9g02864 133 FunFam 30S ribosomal protein S16 1 107 - -
Spst9g02864 133 Pfam Ribosomal protein S16 9 70 IPR000307 GO:0003735|GO:0005840|GO:0006412
Spst9g02864 133 SUPERFAMILY Ribosomal protein S16 3 95 IPR023803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02864 Spst-Chr9 62811772 62812618 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02864 K02959 - gmx:100305630 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02864 9 62811772 62812618 Spst9g02864 9 62811772 62812618 ECH