Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02850 ATGGAGTGCGTTGCAGCGAGAAACATGGCGGCAATGGCGTTTTGTGTGAGTCCTTCGTCGAGGTTGAGGTTGCGGAGGAAGAAGCTGTGGAGAAGAGGAACCGCGTTGTGCGGCCACGGTGTTCGGCGGCGCTCGCGGTGGTTGAATGTGGAGGCGAAGACAGGGAGCGAGAGTTGCGTGGCGACCAAAGAGGACTTCGCCGATGAGGAGGATTACGTGAAGGCCGGTGGCTCCGAACTCGTTTTTGTCCAAATGCAACAGAACAAAGCCATGGAAATGCAATCCAAGCTCGTGGATAAGTTGCCACCTATAGGAGATGATATACTGGATCTAGTCGTGATTGGTTGTGGTCCGGCTGGTCTTGCTCTGGCTGCTGAATCGGCCAAGTTGGGACTAAAAGTTGGGCTGATTGGTCCTGATCTCCCTTTTACAAATAATTATGGCGTGTGGGAGGACGAATTTAAAGGTCTCGGACTTGAAGGTTGCATTGAGCATGTTTGGAAGGATACCATTGTCTATCTCGACAATAAGGACCCCATTTTTATTGGACGTTCCTATGGACGTGTCAGTCGGCATCTGCTTCATGAGGAATTGTTAAGCAGGTGTGTCGAGTCAGGAGTCTCGTATCTTAGCTCAAGAGTAGAAAGTATTATCGAGGCCAGCAATGGTCATAGTCATGTTGTCTGTGAATATGATATTGTAGTGCCCTGCAGGCTTGTTACTGTTGCATCAGGAGCTGCTTCAGGGAAACTATTGCAATATGAGGTGGGGGGTCCAAAGGTTTCTGTCCAAACAGCTTATGGTGTGGAAGTTGAGGTGGAAAACAATCCTTATGATCCAAATCTGATGGTTTTCATGGATTACAGAGACTACATGAAGCAAAATGTTCAAGGTCTAGAAACAAATTATCCAACCTTCCTTTATGCAATGCCCATGTCACGTACAAGAGTGTTCTTTGAGGAAACATGTTTAGCGTCAAAAGATGCGATGCCTTTTGATTTACTAAAGAAGAAGCTCTTTTCGAGATTAAATACAATGGGGATCAGAATTACTAAAACTTACGAAGAGGAATGGTCTTATATCCCAGTTGGCGGATCGTTACCTAACACAGAACAAAGGAACCTTGCATTTGGTGCAGCCGCCAGCATGGTGCATCCAGCCACAGGCACGACTTCATCATGGTACTCCGTTGTGAGATCTTTGTCCGAAGCTCCAAAATATGCTTCGGTAATTGCTACTATTTTAAAAGATGGCCGTGCCAAGGACATTATTACTCAAGGAAGAAAGGTGAATCTATCTATGCAAGAGCATTTGAATTTTCTTTTTCTTTTAGCTTGGAATACGCTTTGGCCACAAGAAAGGAAACGGCAGAGGGCATTCTTTCTTTTTGGATTAGCTCTAATTCTGCAGCTGGACATTGAGGGCATTCGAACATTCTTTCGTACTTTCTTCTGCTTACCTGATTGGATGTGGCAGGGATTTCTTGGCTCCTCTCTCTCATCTACAGATCTTGTATTATTTGCTTTCTACATGTTCATAATAGCACCGAATAACTTGCGAATGTGTCTAGTCAGACATCTACTTTCAGATCCTACTGGTGCAACCTTGATAAAGACTTATTTAACGACTTCGCGATACTCAAGTCGTTAA 1650 0.4497 MECVAARNMAAMAFCVSPSSRLRLRRKKLWRRGTALCGHGVRRRSRWLNVEAKTGSESCVATKEDFADEEDYVKAGGSELVFVQMQQNKAMEMQSKLVDKLPPIGDDILDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFKGLGLEGCIEHVWKDTIVYLDNKDPIFIGRSYGRVSRHLLHEELLSRCVESGVSYLSSRVESIIEASNGHSHVVCEYDIVVPCRLVTVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVFMDYRDYMKQNVQGLETNYPTFLYAMPMSRTRVFFEETCLASKDAMPFDLLKKKLFSRLNTMGIRITKTYEEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGTTSSWYSVVRSLSEAPKYASVIATILKDGRAKDIITQGRKVNLSMQEHLNFLFLLAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFCLPDWMWQGFLGSSLSSTDLVLFAFYMFIIAPNNLRMCLVRHLLSDPTGATLIKTYLTTSRYSSR 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02850 549 Pfam Lycopene cyclase protein 110 520 - -
Spst9g02850 549 PANTHER - 28 541 - -
Spst9g02850 549 FunFam lycopene epsilon cyclase, chloroplastic 106 462 - -
Spst9g02850 549 SUPERFAMILY FAD/NAD(P)-binding domain 108 516 IPR036188 -
Spst9g02850 549 NCBIfam lycopene cyclase family protein 110 522 IPR010108 GO:0016117|GO:0016705
Spst9g02850 549 PRINTS Pyridine nucleotide disulphide reductase class-I signature 110 132 - -
Spst9g02850 549 PRINTS Pyridine nucleotide disulphide reductase class-I signature 240 249 - -
Spst9g02850 549 Gene3D - 109 391 IPR036188 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02850 K06444 - gmx:100788180 952.584