Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02813 ATGGGTTCCGAAAACAAGAGCTTGGAGTTTTTGAACGAGATCGGGTTGAGTTCCTCCAACATTGGCTCTTACATTAATGGGCAATGGAAAGCCACTGGTTCCTCTGTCACTTCTGTTAACCCTTCTAACAATCAGACCATAGCTGAAGTGACTGAAGCTACTTTGCAAGATTATGAGGAGGGTTTGCAAGCTTGCAATGAAGCAACCAAGACATGGATGACTATTCCGGCACCAAAGAGAGGTGAGATTGTAAGACAGATTGGTGAAGCTTTGAGGGCCAAATTGAATCCTCTGGGTAGGCTTGTGTCTCTTGAGATGGGAAAAATTCTTGCAGAAGGAATTGGGGAAGTTCAGGGACAACCTACTTTATATTGTTCTGATGACATTTTATGCCCTGTAGCTGATCATGTTGCTATTCGTCTGGCAAATGTTATTAGAAATGAAATTATTGATATGTGTGATTACGCTGTTGGGCTAAGCCGGCAATTGAATGGATCAATTATACCATCAGAACGTCCGGATCATATGATGTTTGAGGTATGGAACCCATTAGGAATAGTTGGTGTAATCACTGCATTCAACTTTCCATGCGCTGTTCTAGGATGGAATGCTTGCATTGCATTGGTCTGTGGCAACTCTGTTGTGTGGAAGGGTGCTCCAACAACTCCTTTGATAACGATTGCCGTGACAAAGCTAGTAGCTGAAGTTCTTGAGAGGAACAATTTACCTGGTGCAATATTCACCTCTTTCTGTGGAGGTGCGGACATTGGTCAGGCAATAGCAAAAGATACACGCATTCCCCTGGTTTCATTTACTGGAAGTACAAAGGTGGGCTTGATGGTCCAACAAACAGTTAATCAGAGATTTGGTAAATGCTTGCTTGAGTTAAGTGGTAACAATGCAATAATAGTCATGGATGATGCAGACATTAAACTGGCTGTACGCTCTATTTTGTTTGCTGCTGTGGGTACTGCTGGTCAGCGGTGTACAACCTGCAGGAGACTGTTTCTGCACGAGAGTATTTACACCAATGTACTTGACCAACTTACTGGACTCTACAAGCAAGTCAAAATTGGGAACCCCTTGGAGAAGGGGACTCTAGTTGGGCCATTGCATACTCGTACTTCAGTGGAAAACTTTCAGAAGGGTATTTCAGTCATAAAATCCCAGGGAGGGAAGATCCTCACAGGTGGATCTGTAATAGAGTCAGAAGGAAATTTTGTACAACCAACAATTGTTGAGATTTCTTCAGATGCTCCTGTAGTTAAAGAAGAATTGTTTGGTCCAGTACTTTATGTTATGAAATTTCAGACTCTGGAAGAAGCAATTGCCTTGAACAATTCCGTACCTCAAGGATTAAGTAGTTCAATCTTCACACAAAGGCCTGGAACTATATTCAAATGGATCGGGCCACGAGGTAGTGATTGTGGTATAGTGAATGCAAACATACCTACAAATGGAGCTGAGATCGGTGGTGCCTTTGGTGGAGAAAAGGCGACTGGTGGTGGTCGTGAAGCAGGAAGTGACTCATGGAAGCAATACATGCGTCGTTCTACATGTACCATCAATTATGGAAGTGAACTACCATTAGCTCAGGGAATCAACTTTGGTTAG 1614 0.4294 MGSENKSLEFLNEIGLSSSNIGSYINGQWKATGSSVTSVNPSNNQTIAEVTEATLQDYEEGLQACNEATKTWMTIPAPKRGEIVRQIGEALRAKLNPLGRLVSLEMGKILAEGIGEVQGQPTLYCSDDILCPVADHVAIRLANVIRNEIIDMCDYAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNSVVWKGAPTTPLITIAVTKLVAEVLERNNLPGAIFTSFCGGADIGQAIAKDTRIPLVSFTGSTKVGLMVQQTVNQRFGKCLLELSGNNAIIVMDDADIKLAVRSILFAAVGTAGQRCTTCRRLFLHESIYTNVLDQLTGLYKQVKIGNPLEKGTLVGPLHTRTSVENFQKGISVIKSQGGKILTGGSVIESEGNFVQPTIVEISSDAPVVKEELFGPVLYVMKFQTLEEAIALNNSVPQGLSSSIFTQRPGTIFKWIGPRGSDCGIVNANIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02813 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 298 489 IPR016163 GO:0016620
Spst9g02813 537 CDD ALDH_F7_AASADH 24 525 - -
Spst9g02813 537 SUPERFAMILY ALDH-like 18 526 IPR016161 GO:0016491
Spst9g02813 537 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 294 301 IPR029510 GO:0016491
Spst9g02813 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 17 126 IPR016162 GO:0016491
Spst9g02813 537 FunFam Alpha-aminoadipic semialdehyde dehydrogenase 298 489 - -
Spst9g02813 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 147 514 IPR016162 GO:0016491
Spst9g02813 537 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 148 537 IPR044638 GO:0004029
Spst9g02813 537 Pfam Aldehyde dehydrogenase family 147 517 IPR015590 GO:0016491
Spst9g02813 537 Pfam Aldehyde dehydrogenase family 33 118 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02813 Spst-Chr9 62374708 62381010 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02813 1 537 Acyl Lipid Metabolism Gene Families AT1G54100 76.164 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02813 K14085 - gmx:100811186 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02813 9 62374708 62381010 Spst9g02813 9 62374708 62381010 ECH