Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02809 ATGGCAACCCTCCACACACAGACCCTTCATCCATGGCTGCCTCTTACCAGGCTTCACATTCTCTTCCACTTACTCTCACTCTTCGCTCTATTTTACTACCGCGTAAACCTTCTTCTCCACCAACCAACCCTCCCATGGCTTCTCATCACGCTCGCCGAGGCCATCTTCGCCCAGCTCTGGCTCTACAACCAGGCCTTCCGCTGGCGTCCGGTCACCCGCGCGGTCGCCACGGAGAACCTGCCCACCGAGGCCAACCTGCCCGGGGTGGACATCTTCGTCTGCACGCTTGACCCTCAGAAGGAGCCCACCGTGCAGGTGATGGACACTGTCATCTCCGCCATGGCCATGGATTACCCCGCCGAGAAACTGGCGGTGTATCTCTCCGACGACGGTGGATGTCCCGTGACTCTGTTTGGGATGAGAGAGGCTGTGGAGTTCGCGAAAGAGTGGGTTCCTTTCTGCAGAAAGCATGGGGTGAAGTTGAGGTGTCCGAAGGTGTTCTTCTCTCCGATGGGGGAGGATGAACACCTCCTCCGCAGCGACGGATTCAGGGCAGAGCAAGAACGGCTCAAGGCTAAATACAGAGATATGCAAAAAAATATTGAGATATTTGGAAGAGACCCTAAAAATAGTTCTCTTGTGTTGGATAGACCAACTCGTATTGAGATTCTGAATGAGCAATCAGAAATGCCATTGGTGGTTTATGTGTCTCGTGAAAGAAGGCCAACTATTCCTCATAGATACAAAGGAGGAGCCCTGAATACATTGCTGAGAGTCTCAGGGCTATTGAGTAATGGCCCTTATGTGCTTGTTGTTGACTGTGATATGTATTGCAATGATCCATCTTCAGCTAAACAAGCCATGTGTTTTTTTCTTGATCTTGAAACCTCCAAAGACATTGCTTTTGTCCAATTTCCTCAAATGTTTCACAACCTTAGCAAGAAAGACATCTATGATAGTCAAAGTAGGCGTGCTTTTACGACAATGTGGCAAGGAATGGATGGACTAAGAGGACCAGGTCTTGCTGGTAGTGGTTGTTACCTAAGCAGAAGTGCACTACACCTTCAAAGCCCAAATCAAAATCAAAATGATGTCTTTGACCATAATGCGCCAAAAGAGTTTGGCAAGTCTACCATGTACATTGAATCGTTAAAGGCCATCATCTATGGAAATCAAAGTACCCAAAAGCAAATTCCAAGAGATGTAATTTTGGAAGAAGCTCAAGCAGTGGCCTCTTGTTCCTATGAAAAAGACACAAATTGGGGTGAAGAGGTAGGATTCTCATATGCTATATTACTGGAGAGTACAGTTACTGGGTATCTTCTCCACTGCAGAGGGTGGAGATCAACTTACCTTTACCCCAAAAGACCATGTTTTTTGGGATGTGCCCCCATTGACTTTAAAGAGGGCATGCTTCAAATGGTGAAATGGGGTTCTGAACTTTTCCTGCTAGGAGTGTCCAAGTATAGCCCTTTCACTTATGGGATTTCAAGAATGCCTATTATGCATTGCTTTACCTTTTGCTACTTCACATCCACAACTCAGTATGGTGTTGCCTTAATGATATATGGCCTCATTCCCCAATTATGCTTCTTCAAAGGAATTCCTCTGTTTCCAATGGTTACAGAACCATGGTTTGGAGTTTTTGCAATATTATTTATATCAAGTCATGGTCGACATTTGATTGAGATTCTTTATGGTGGTGGGTCTCTGAGATCATGGTGGGATGAACAGAGAAGTTGGATTATAAAGTCACTTGTTGGAGGCATATTTGCACCCATAGTGGCAATCAAGAAACTCTTTGGGTTGAACAAAGCAAAATTCACTTTATCAAACAAAGTTATTGATGAAGAAAGTTTCAAGAAATATGAGCAGGGTAAGTTCAATTTCCAAGGTGCAGCTTTGCTCATGGTTCCATTGGTTATGTTACTCACAGTCAACATTGTTTGCTTCTTTGGTGGCTTATGGAGATTGCTCTTTGTCAAAGATTTTGAAAACATGTTTGGTCAATTTTTTCTCCTTAGCTATTTGGTGGCTCTTGGTTATCCAATTTTTGAGGGGATAATAACCATGAAAAGTAAAGGTGGGTAG 2091 0.4452 MATLHTQTLHPWLPLTRLHILFHLLSLFALFYYRVNLLLHQPTLPWLLITLAEAIFAQLWLYNQAFRWRPVTRAVATENLPTEANLPGVDIFVCTLDPQKEPTVQVMDTVISAMAMDYPAEKLAVYLSDDGGCPVTLFGMREAVEFAKEWVPFCRKHGVKLRCPKVFFSPMGEDEHLLRSDGFRAEQERLKAKYRDMQKNIEIFGRDPKNSSLVLDRPTRIEILNEQSEMPLVVYVSRERRPTIPHRYKGGALNTLLRVSGLLSNGPYVLVVDCDMYCNDPSSAKQAMCFFLDLETSKDIAFVQFPQMFHNLSKKDIYDSQSRRAFTTMWQGMDGLRGPGLAGSGCYLSRSALHLQSPNQNQNDVFDHNAPKEFGKSTMYIESLKAIIYGNQSTQKQIPRDVILEEAQAVASCSYEKDTNWGEEVGFSYAILLESTVTGYLLHCRGWRSTYLYPKRPCFLGCAPIDFKEGMLQMVKWGSELFLLGVSKYSPFTYGISRMPIMHCFTFCYFTSTTQYGVALMIYGLIPQLCFFKGIPLFPMVTEPWFGVFAILFISSHGRHLIEILYGGGSLRSWWDEQRSWIIKSLVGGIFAPIVAIKKLFGLNKAKFTLSNKVIDEESFKKYEQGKFNFQGAALLMVPLVMLLTVNIVCFFGGLWRLLFVKDFENMFGQFFLLSYLVALGYPIFEGIITMKSKGG 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02809 696 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 15 694 - -
Spst9g02809 696 Pfam Cellulose synthase 365 693 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst9g02809 696 Pfam Cellulose synthase 227 362 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst9g02809 696 Pfam Cellulose synthase 89 201 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst9g02809 696 SUPERFAMILY Nucleotide-diphospho-sugar transferases 89 454 IPR029044 -
Spst9g02809 696 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 196 357 IPR029044 -
Spst9g02809 696 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 78 168 IPR029044 -
Spst9g02809 696 FunFam Cellulose synthase-like protein G2 isoform A 77 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02809 Spst-Chr9 62322161 62327595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02809 17 695 Glycosyltransferase AT4G24010 35.070 2.66e-152 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02809 - K26483 gmx:100802222 1085.09