Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02792 ATGAGAACGTCGTCGCTTCGGAGATGCGGCACCGGCGACTTCGACGTGCCGGAGAGCTTCGGCACCTCGTCGCCAGCGGCCGGAGGACGCGCCTACGGCGCCATGATGCCGGTGTTCCTCAGCGACCTCCGGAGCAACCATCACAAGGAGCTCGTGGAGATCACGCTGGAGCTCGAAAACGACGCCGTCGTGCTCCGCAACGTATCCCCAGCGCCGTATTCCGCTCCCAACGCTTCTCCGTCGTCGAGCAGCGCAGGAGGTGACGGCGGCGGCGGCGTGGCGCGGAGCCTCTCGATTACTTCGAGGATTCGGAGGAAGTTCCCGTGGCTGCGGTCGATGTCGTCGGCGTCGGTGGAGAGTGTAGCCGCGGCGGAAGATCCGGTGACGACGGCGCGAAACGCGCGGAAAATGAGAGTGAAGCTTGAACGGACAAGGTCGAGCGCTCAGAGAGCTCTAAAAGGCCTGAGATTCATCAGCAAGTCCGGGGAAGCCAGCGAGGAGTTGTGGCGAAAGGTGCAAGAAAGGTTCAGCTTGTTGGCCACGGATGGCTTACTGGCTCGAGAAGACTTTGGTGAATGCATAGGGATGGAAGATTCGAAGGAGTTTGCAGTGTGTATATTCGACGCATTGACTCGAAGGAAGGAAAGGAGAGTGAATAGCATAAACAGAGAAGAGTTGCACGAGTTCTGGTTGCAAATTTCAGACCAGAGTTTTGATGCTCGGCTGCAGATTTTCTTTGACATGGCAGACAGTAACGAAGACGGAAGAATTACTAGGGAGGAAGTACAAGAGCTCATAATGCTCAGTGCTTCTGCAAACAAGTTGTCGAAGCTAAAGGAACAAGCTGAAGGATACGCTTCGTTAATAATGGAAGAATTAGATCCAGAAAACCTGGGTTATATCGAGCTGTGGCAGCTAGAAATGTTGTTACTGGAGAAGGATAGGTACATGAACTACAGCAGACAACTGAGCAGCGCAAGTGTAAACTGGAGTCAAAATCTGAGTGACACAAGGCATAGAAATGATATACAAAGATTGCGCAGGACCCTCCAATGTCTTGCATTAGAGTATTGGAGAAGGGGTTGGATTTTGTTGTTGTGGTTGGTTGCCAGTGCAAGCCTCTTTGGCTGGAAATTTTACCAGTATAGAAACAGATCAAGTTTTCAAGTTATGAGCTACTGCATACCAATAGCTAAGGGTGCTGCAGAGACACTCAAGTTCAACATGGCTCTCATCCTCTTACCAGTTTGTCGAAACACTCTCACATGGCTCCGTTCCACTCGAGCCAGGACGTTTGTGCCCTTTGATGACAACATTAACTTCCACAAGATGATTGCATTCGCCATAGCTGTTGGAGTCGCCGTTCATGCCGGCAACCATCTGGCGTGTGATTTCCCCCTTCTCGTAAACTCATCTCCAGAAAAATTTGCACTTATAGCTTCAGATTTCAATTACAGAAGACCAACGTACAAAAAACTTCTGATCAGTGTAGAAGGCGTAACTGGAATCTCAATGGTTATTCTCATGGCCATCTCTTTCACTCTAGCAACTCACCATTTTCGGAGAAACGCACTCAGGCTTCCTTCACCCTTTGACAGATTAACAGGCTTCAACGCGTTTTGGTACTCACACCACCTTTTTGCTCTGGTCTACGTTCTGCTACTCATCCATGGAACATTCTTGTACTTGACCCATCGGTGGTACCAGAAAACGACATGGATGTATATCTCTGTTCCTCTGTTGTTGTATATAGCAGAGCGCACTCTACGCACTCGAAGATCAGCACATTATACGGTGAAAATTCTGAAGGTCTCGGGGCTACCAGGAAATGTCTTCAGTTTAATCATGTCTAAGCCTAATGGATTCAAGTACAAAAGCGGACAGTACATATTTTTACAGTGTCCAAAAATCTCTCCCTTTGAGTGGCACCCGTTTTCCATCACCTCAGCTCCAGGAGATGAGTACCTAAGTGTTCACATCCGCACAGTGGGAGACTGGACTCAGGAACTTAAGCATCTCCTAACAAAAGAAGATGACAAATTACCTTCTGTTAAACGTAGTGCAACGTTTGGTGAACTAATGCAACTGGATCAAAGAGGACAACCGAGACTGCTTGTTGATGGCCCTTATGGTGCTCCAGCACAAGACTACCAGAGCTTTGATGTACTCCTCCTCATAGGATTAGGAATTGGAGCAACGCCGTTCATTAGCATTCTCAGAGATCTTCTCAATAACACCAAAACAATGGATGAACTAGGGGAACCATCAAACACGGAAACAAGTCAAACAACCAGATCAGACGAGAGCTCTAATAGTTTTACTTCTTCAAACTTAACACCAGGAGGAAATAAGCGATCACGAAGGACTACAAATGCTTATTTCTACTGGGTTACTAGGGAGCCTGGATCTTTTGAATGGTTTAAAGGAGTTATGGATGAAGTTGCAGAAATGGACCACAAAGGTCAAATTGAGCTCCATAACTATCTTACAAGTGTCTATGAAGAGGGGGATGCGAGATCAACTTTAATCACCATGATTCAAGCACTGAACCATGCCAAACATGGCGTTGACATCCTGTCAGGCACTCGAGTAAGGACACACTTTGCTAGGCCTAATTGGAAAGAGGTTTTCAACAAGATTGCCTCTAAACATCCGTTTTCTACAGTAGGGGTGTTCTATTGTGGGATGCCAGTGTTGGCAAAGGAGCTAAAGAAGCTCTCACTTGAACTCAGCCACAAGACAACTACACGCTTCGAGTTTCACAAGGAGTACTTCTGA 2778 0.4762 MRTSSLRRCGTGDFDVPESFGTSSPAAGGRAYGAMMPVFLSDLRSNHHKELVEITLELENDAVVLRNVSPAPYSAPNASPSSSSAGGDGGGGVARSLSITSRIRRKFPWLRSMSSASVESVAAAEDPVTTARNARKMRVKLERTRSSAQRALKGLRFISKSGEASEELWRKVQERFSLLATDGLLAREDFGECIGMEDSKEFAVCIFDALTRRKERRVNSINREELHEFWLQISDQSFDARLQIFFDMADSNEDGRITREEVQELIMLSASANKLSKLKEQAEGYASLIMEELDPENLGYIELWQLEMLLLEKDRYMNYSRQLSSASVNWSQNLSDTRHRNDIQRLRRTLQCLALEYWRRGWILLLWLVASASLFGWKFYQYRNRSSFQVMSYCIPIAKGAAETLKFNMALILLPVCRNTLTWLRSTRARTFVPFDDNINFHKMIAFAIAVGVAVHAGNHLACDFPLLVNSSPEKFALIASDFNYRRPTYKKLLISVEGVTGISMVILMAISFTLATHHFRRNALRLPSPFDRLTGFNAFWYSHHLFALVYVLLLIHGTFLYLTHRWYQKTTWMYISVPLLLYIAERTLRTRRSAHYTVKILKVSGLPGNVFSLIMSKPNGFKYKSGQYIFLQCPKISPFEWHPFSITSAPGDEYLSVHIRTVGDWTQELKHLLTKEDDKLPSVKRSATFGELMQLDQRGQPRLLVDGPYGAPAQDYQSFDVLLLIGLGIGATPFISILRDLLNNTKTMDELGEPSNTETSQTTRSDESSNSFTSSNLTPGGNKRSRRTTNAYFYWVTREPGSFEWFKGVMDEVAEMDHKGQIELHNYLTSVYEEGDARSTLITMIQALNHAKHGVDILSGTRVRTHFARPNWKEVFNKIASKHPFSTVGVFYCGMPVLAKELKKLSLELSHKTTTRFEFHKEYF 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02792 925 Pfam Ferric reductase like transmembrane component 400 555 IPR013130 -
Spst9g02792 925 FunFam Respiratory burst oxidase homolog A 585 677 - -
Spst9g02792 925 Gene3D Translation factors 583 684 - -
Spst9g02792 925 ProSitePatterns EF-hand calcium-binding domain. 250 262 IPR018247 -
Spst9g02792 925 CDD NOX_Duox_like_FAD_NADP 601 877 - -
Spst9g02792 925 SFLD NADPH oxidase subgroup (NOX) 133 925 - -
Spst9g02792 925 ProSiteProfiles EF-hand calcium-binding domain profile. 237 272 IPR002048 GO:0005509
Spst9g02792 925 Gene3D - 141 258 - -
Spst9g02792 925 MobiDBLite consensus disorder prediction 72 86 - -
Spst9g02792 925 MobiDBLite consensus disorder prediction 749 785 - -
Spst9g02792 925 Pfam FAD-binding domain 598 713 IPR013112 GO:0016491
Spst9g02792 925 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 719 925 IPR039261 -
Spst9g02792 925 Pfam Ferric reductase NAD binding domain 720 907 IPR013121 GO:0016491
Spst9g02792 925 PANTHER NADPH OXIDASE 202 925 - -
Spst9g02792 925 Pfam Respiratory burst NADPH oxidase 140 240 IPR013623 GO:0004601|GO:0050664
Spst9g02792 925 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 594 716 IPR017927 GO:0016491
Spst9g02792 925 Coils Coil 131 151 - -
Spst9g02792 925 SUPERFAMILY EF-hand 157 321 IPR011992 -
Spst9g02792 925 SUPERFAMILY Riboflavin synthase domain-like 597 713 IPR017938 -
Spst9g02792 925 Gene3D - 711 925 IPR039261 -
Spst9g02792 925 MobiDBLite consensus disorder prediction 72 93 - -
Spst9g02792 925 CDD EFh 220 267 IPR002048 GO:0005509
Spst9g02792 925 FunFam Respiratory burst oxidase protein E 711 925 - -
Spst9g02792 925 PRINTS Cytochrome B-245 heavy chain signature 445 463 IPR000778 GO:0016020|GO:0016491
Spst9g02792 925 PRINTS Cytochrome B-245 heavy chain signature 702 715 IPR000778 GO:0016020|GO:0016491
Spst9g02792 925 PRINTS Cytochrome B-245 heavy chain signature 725 742 IPR000778 GO:0016020|GO:0016491
Spst9g02792 925 PRINTS Cytochrome B-245 heavy chain signature 537 557 IPR000778 GO:0016020|GO:0016491
Spst9g02792 925 FunFam Respiratory burst oxidase homolog A 141 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02792 Spst-Chr9 62115161 62122048 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02792 23 925 Miscellaneous Gene Families AT1G19230 62.447 0.0 1159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02792 K13447 - gmx:100805697 1648.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02792 9 62115161 62122048 Spst9g02792 9 62115161 62122048 ECH