Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02721 ATGGAGCAGAAAGTGGAAGAAACGAAAAACGCAGTGAGAATCTTCATCGGAGGATTGGGGGAGGCAGTGAGCGCCGAAGACCTTCGAAGCTTATTCTCCTCTCTTGGTAGCGTCCAAGCCGTCCAAACCATCCGAACCAAAGGTCGCAGTTTCGCCTACCTCGACTTCCTTTCCGACCCTAAATCCCTTTCCAAGCTCTTCAGCAAGTATAATGGGTGTCTGTGGAAGGGTGGAAGGCTGAGACTGGAAAAGGCCAAAGAAGATTATCTCACGCAGTTGAAGAGAGAATGGGAGCAAGTCGCTCTTGATGAAGCTACTCAACCAGCCCCCGCTTCTCCTAAGGAAATGCCCTACACCACCACAATCCCTTCCAAGTCAAATACCAAACACCTCAATATTTTCTTTCCCAGATTGAGAAAGGTAACCTGTTTAGGTGCTTGTTTTTAG 447 0.4832 MEQKVEETKNAVRIFIGGLGEAVSAEDLRSLFSSLGSVQAVQTIRTKGRSFAYLDFLSDPKSLSKLFSKYNGCLWKGGRLRLEKAKEDYLTQLKREWEQVALDEATQPAPASPKEMPYTTTIPSKSNTKHLNIFFPRLRKVTCLGACF 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02721 148 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 14 58 IPR000504 GO:0003723
Spst9g02721 148 CDD RRM_NOL8 13 86 IPR034138 -
Spst9g02721 148 SMART rrm1_1 13 83 IPR000504 GO:0003723
Spst9g02721 148 SUPERFAMILY RNA-binding domain, RBD 7 87 IPR035979 GO:0003676
Spst9g02721 148 PANTHER TRANSCRIPTIONAL REGULATOR 6 142 - -
Spst9g02721 148 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 87 IPR000504 GO:0003723
Spst9g02721 148 Gene3D - 1 91 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02721 Spst-Chr9 61437265 61437947 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02721 - - vum:124830427 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02721 9 61437265 61437947 Spst9g02721 9 61437265 61437947 ECH