Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02681 ATGGCGAAACTGAAGATAGGAGGGATATGGGCGGGGGTAGTGGAAGAGGTGGACCTCCACGCCTGGACTCTCGCCACACTCCGCGACCACGTCGCTGAGCGATCCAACTCTTCCTCCGACTCCATCAATCTCATCTGCGCCGGCAGGATTCTCCGAGACGACGCCGTTCCGCCCCAAACCCTCTCCCAACTCGGCGTAAAAAACAACTCTAAGATTCTCGCTACGCGCGCCTCCACTCCGCAGCAAGACCGCTCCCTCCTCGCGGAGGAAGAGCGTGCCTCCAGACTCGCGCGTATCAGGTCCGCTGCGACTGCGATGGCGGAACGCCACGCGGATGGTGCGTTGCCGGTTGAGAACTTCAACATCGAAGTTGAGGATCAGAATGGACAGAAAGTGCGATTAGGCTCTGAGACTGATCAAAAGGCGGTGATGATGGGACTGATGCTTCACGCGAAGGGGAAGAAACTCATCAAACAGGAGAACTACAAAGATGCGCTGGAAGTGCTTAGCATGGGAGAGGAGTCATTCTCTCTTTGTGATTCAGAAGTCATTGAGCTTATTGACAATGTTCCTATACTACAAATAGACATGGTATGGTGCTATTTTATGATACGGGACATCAGATGGCTCGCAGACGCGGGAAAGCGTCTTGAAATAGCTAGGATGGGTATTGAACGGGCTCATGGAAAGGATTCTCATCGCCTCAGGATCTTACAAGGTGGTCGATATCCAGAACTTGCATTGCATTTGAGACTAGAGCTGCTTGAAGGGGTGGTGGCATATCATACTGGGCAGATAGAGAAATCCAGAAAAGCATTAGCCTCTGCAAAAACTAAGTTTGTCCAGCTGCAAGTGTCAGATGAAGCCTTGTCATTTGTTATGAGCATGGGCTTTGGTGAACGTGATGCCAAGCGAGCATTGCGAATGAACAATCAAGATGTTGGGGGTGCCATTGATTTCCTTGCTGAGGAGAAGGCAAAGAAATTGCAAATGGAGGAGGAGGATAGTCAGAGAAGAAAGGAAATTAAGGAACAAAGGCGGTATGGGCTGACACCCTTAAAGAAAGCAGTGGATCTAGAGAGATTGAAGGAATTGGTCTCTATTGGGTTTGAGAAGGAGCTTGCTGCTGAAGCCCTTAGAAAAAATGAAAATGATACTCAGAAAGCATTGGATGATTTGACGAATCCTGAAACTAATTCTGCTTTACAGGTTACGATCGACTCAAGAAAAAGGAAGAGACAGATACAAGCAAGAGATTCTGTAGTTGAAAAAGTTGTGCAAATGGGTTTTGAAAGAGAAAGAGTGGTTGCTGCTGCTGTGGCTGGAGGTAGTGTAGAACAAGTTTTGCAAAGACTGACAGCACAACCTGTAGCTGGACCCACATCAGCTTCCATAAACACAAATTCAACGGAAGCTCCACATGTTGGTGCAAGTTCATCTTCTCCTTTACCTAACAATGTTAATTGTGATGATCTTAACATGATGAATGAGGTTGAAGACAGTAGAACACAACGAGATGTAGAAATGGAAGATGAGCTCTCTGCTGATATTGCGAGAACAGATGCCATGGCTGATTATGACATTGAAGTTAACGTAGAAGGAGAAGCCATAAGTGAGTACATGGCCCTGGTTGAGTCGGCAAGAAGTGGTAGGACAATTGCTCCTTCCCAGTAA 1674 0.4749 MAKLKIGGIWAGVVEEVDLHAWTLATLRDHVAERSNSSSDSINLICAGRILRDDAVPPQTLSQLGVKNNSKILATRASTPQQDRSLLAEEERASRLARIRSAATAMAERHADGALPVENFNIEVEDQNGQKVRLGSETDQKAVMMGLMLHAKGKKLIKQENYKDALEVLSMGEESFSLCDSEVIELIDNVPILQIDMVWCYFMIRDIRWLADAGKRLEIARMGIERAHGKDSHRLRILQGGRYPELALHLRLELLEGVVAYHTGQIEKSRKALASAKTKFVQLQVSDEALSFVMSMGFGERDAKRALRMNNQDVGGAIDFLAEEKAKKLQMEEEDSQRRKEIKEQRRYGLTPLKKAVDLERLKELVSIGFEKELAAEALRKNENDTQKALDDLTNPETNSALQVTIDSRKRKRQIQARDSVVEKVVQMGFERERVVAAAVAGGSVEQVLQRLTAQPVAGPTSASINTNSTEAPHVGASSSSPLPNNVNCDDLNMMNEVEDSRTQRDVEMEDELSADIARTDAMADYDIEVNVEGEAISEYMALVESARSGRTIAPSQ 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02681 557 Gene3D - 15 85 - -
Spst9g02681 557 Coils Coil 326 346 - -
Spst9g02681 557 SMART uba_6 418 454 IPR015940 -
Spst9g02681 557 SMART uba_6 286 323 IPR015940 -
Spst9g02681 557 SMART uba_6 358 395 IPR015940 -
Spst9g02681 557 MobiDBLite consensus disorder prediction 457 486 - -
Spst9g02681 557 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 356 396 IPR015940 -
Spst9g02681 557 CDD UBA 362 391 - -
Spst9g02681 557 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 2 548 IPR039749 -
Spst9g02681 557 Gene3D - 286 325 - -
Spst9g02681 557 Gene3D - 359 396 - -
Spst9g02681 557 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 284 324 IPR015940 -
Spst9g02681 557 SUPERFAMILY UBA-like 278 324 IPR009060 GO:0005515
Spst9g02681 557 SUPERFAMILY Ubiquitin-like 22 76 IPR029071 -
Spst9g02681 557 SUPERFAMILY UBA-like 354 396 IPR009060 GO:0005515
Spst9g02681 557 ProSiteProfiles Ubiquitin domain profile. 23 72 IPR000626 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02681 - - gmx:100804062 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02681 9 60887844 60892519 Spst9g02681 9 60887844 60892519 ECH