Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02628 ATGGCGAAGAAAGAGATGAAAGTTGTGAAGAATTTGGACTTGGAAAGGTACATGGGTCGATGGTATGAGATTGCTTCGTTCCCATCGTTTTTTCAGCCCAGGAACGGTGTGAACACCAGAGCCACATATTCCCTTAACAGTGATGGGACTACTGTGCATGTGCTCAACGAGACGTTGAGTGGTGGGAAGAGAGTCTCCATAGAGGGTGTTGCTTATAAGGCTAACCCCAACAGTGATGAAGCCAAGTTCAAGGTCAAGTTTTACGTTCCTCCCTTCCTACCCATCATCCCTGTTGTTGGAGACTACTGGGTTTTGTTCATTGATGATGATTATCAGTACGCTTTAATTGGCCAACAAAGCAGGAAATACCTCTGGATTTTAAGCAGGAATCCCCATTTGGATGAAGAGATCTACAATTTGCTTGTTCAGATAGCTGTGGATCAAGGATATGATGTGAGCAAACTTCACAAGACTCCACAGAGCGATCCTCCACAGAGCGATCCTCCACCAGAGGAAGAAGGCCCCAAAGATTCCAAAGGCATTTGGTGGCTCAAATCCCTTTTGGGGAAATAG 573 0.4555 MAKKEMKVVKNLDLERYMGRWYEIASFPSFFQPRNGVNTRATYSLNSDGTTVHVLNETLSGGKRVSIEGVAYKANPNSDEAKFKVKFYVPPFLPIIPVVGDYWVLFIDDDYQYALIGQQSRKYLWILSRNPHLDEEIYNLLVQIAVDQGYDVSKLHKTPQSDPPQSDPPPEEEGPKDSKGIWWLKSLLGK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02628 190 PRINTS Bacterial lipocalin signature 149 159 IPR002446 -
Spst9g02628 190 PRINTS Bacterial lipocalin signature 12 26 IPR002446 -
Spst9g02628 190 PRINTS Bacterial lipocalin signature 122 133 IPR002446 -
Spst9g02628 190 MobiDBLite consensus disorder prediction 154 180 - -
Spst9g02628 190 CDD lipocalin_Blc-like 9 158 IPR047202 -
Spst9g02628 190 PIRSF Lipocalin_ApoD 1 171 IPR022271 -
Spst9g02628 190 PANTHER APOLIPOPROTEIN D 4 168 - -
Spst9g02628 190 FunFam Temperature-induced lipocalin 1 164 - -
Spst9g02628 190 ProSitePatterns Lipocalin signature. 11 24 IPR022272 -
Spst9g02628 190 SUPERFAMILY Lipocalins 5 165 IPR012674 -
Spst9g02628 190 Gene3D - 1 167 IPR012674 -
Spst9g02628 190 Pfam Lipocalin-like domain 12 160 IPR000566 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02628 Spst-Chr9 60332019 60333013 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02628 K03098 - pvy:116131079 309.301