Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02593 ATGGCTTCTGATCAAATCACGATGTCGATGCCTGAGGAGAGAGGCGCCGGAGGCAAGCTCCGAAAACCGCCGCCGAGAAAGCCGCCTCCTAGCCCTTACGCACGTCCGGTCGATACCAGGCGCCACCGTTGGATTTCGAAGCTTGTGAATCCCGCTTACCGCCTCATCGCCGGCGGAGCCACTCGTCTTCTCCCTTCCCTATTCTCCGCCGCGACTCCTCCCTCTCCTCTTCCTTCCCCTACCTCTTGCGCTGAAGATCAAGCAAATTCACGTTTGGCTTGTGGCAACATACCTAACCGTTGCAGAAGCAGAACAGACAAAGAAGTCGCAGGTGCTAGGGCAAGGGAAATAGATAGTGATGAGAAGCAAGCAAGAATCTGTGACAGCCAGTCACAATGCGACTGCCCTTGGAGGAGATGGAGGGTGTCTCTCCTCTACAATCTAGCACAACTGCAGGGCTATAATGCAAAGTTGATAACCATTCATAAAGCAAGTTATATATGGGAAACTGGTGACGGTCATGAGGATGGTTCACGCAAAAGTGATATTCATCTTTTGGCATACAAATCATCTGAAATGGCTATTGCTGATGGCATTAGTGGTAAACTGACAAGCAGTTCAGACTTGGTTATGTCCAGACAAGATGATAAAGTAGAGAAATCTGATCAAAATAGGCTTTCAGATATTGAGCAACTGGTCAAAGGGAAGAAATTCTCTAGAGATGAATTTGATCATTTAGTGGCTGTATTAAATTCGAGAGTGATGGACCTTTCTAATCTTGAAAAAGGAAAGGAAAGTACAAACATGACACAGGGGCTTCCAAACGTTTCAAACGGACAAAGGAATGAAGAGCCAATTGGAGCTATATGGGGAACCTCAAAACCTCTTGGTCTTTCAAAAGTTCGGGAAGGACTTGATGCTTCACCAATAGAGATTGCACGAGCATATATGGATTCTCGGGCATTAGAAGCAGGTCCCAGTTCTAAGAACATGATTCATGCTGTTGAAAGCACGGTGTTGCATGGTGTTGAAGCTGCAATAAAACCATATGATCCAACACCATCAAAGAAGTCGACGACATGTTGGCCAGGTGCTGTGGTGCAGGATGCTTATACAACACCACAAAGTCAGAGGAGCAGATATGGACTTCATAATTTCCCCCGTACTCCTTATTCTAAAACTCTTTTAACAAAGTCCAAGTCCAAGATGATTCACTTGCAAGGAGATAACAACCACATTTCATCAACTCCCATCCTTCAATCAAAGACCGCAATGTATCTGCAGGATAAATCTAAAACTGTAGCATCAGAAAGTGTATATGGATCTGTTGGACCTATTCGTCGGACTAGGCATAAGGTTGGTGCACAATCGTCTTCAAGAAGACCAGTTTATTCATCCCTGAATGGTCCTTCACTGAGAGAAAGTTCTGGTGTTGTTGAAGGTTTCACTCCTGTTGCAAAGTGCACGGAAACTATTGGGACAGGCTCCACTCATAAACCACTGGGCTTTCCGGTGGGTGCTCCAACCGTACACATGCATTCCAGTTTGATGGCTAAGAAAATATTAGACCATATCGATAGAAACGTTCCCACACCTAAAGAGAAATCTGCTGAGCTCAAGCTGGCAACAAAATGGAAGAACTCTGAATCTGATTTTAGTACTATCTCTTCAAATGAAGATAATGACTTGCATAAATTGAATGATGTTAGCCCTCATATATATGATGGGCTTGAAAGAAAGAAATCTACTCTATTAATTGAAGGCAAGGGAAACTACCGTGTTGATATGCAATTGAAGGACAGTACAAATAAATCTATCAATGTCAGAAATGAAGAAACTTTGGCGCCTGATGTAAATTCTTATAATAGCAGCAACCCTAGACATGACAATGATGATGCTCCGACAATAACTCTCCCAAGTGGAGGTCAGCCTTATGGGGTAAATCAAGAAAAGAAGCCTCCTACTAACCCTGCAACCATCAAACCAGTTCTACCTCCTATTTCTATCAAGAAGCCTGAGTCAAGATGGACAGTAGCATCCGATAATAGCTCTGGATTTACCTTTCCTGTTTCAACATCCTCTTCTGTATTCTCTGAGCCACCGACTCCGTCCATCATGCCTTTGTTTTCTGCTGGGGATCAGCAGCAGTCGAAAGGATCTACCGAACTGTCGTATACATTTGGTTTGAAGAAGGCTAGTCCGGCGCTGATCCAGGGAGTTCCTGTGTCGGAGTGGCAAATGGCGCAGGGCGGGTTGTCTGAATCTTTGTGCATAGCCACTCTGTTGTTCTTCACCGGATTTGCAACATCTTCTTCCACGGACTCTCCGTTGCTCCAACAACAAAAGGACAAGGTTGGTACGCTCCCTGGTCAATCCTTCGACGTCGGCTTTGCACATTACGCTGGGTATATCACCGTCGAGGAGAATTCTGGAAGAACACTCTTTTACTGGTTCATCGAGGCACTTGAAGATCCTCTTTCCAAACCCCTTGTTTTATGGCTCAATGGAGGCGCTTTTGGCACTTCAATACTGGTAGGAAATGCTCTGACAGATGATTTTCATGATCAATTGGGGATGTTCGAATTTATGTGGTCAAGTGGTTTGATTTCGGATCAAACATACAAGCTTTTGAACCTACTTTGTGATAATCAGTCAGTTGAGCATCCTTCACATTCATGTGAACAAGTTTGGGAAATTGCTTATAAAGAACTGGGAAATATAGACCTATACAGTCTCTTTACTCCAAAGTGCCATGCCAATATTAGTCAGTTAAGTCAGCTAGCGAGAAGAAAGCATAGAATAGGTAGACTTGGTCTCAGTGCAGAGTATGACCCATGCACTGAAACACACTCCATTGTATACTTCAATCAACGTGAGGTCCAAACAGTTCTTAATGTTGATCGAGATCATAAGCCTGCTAGATGGGAGACTTGCAGTGAGGTGGTAAATACAAACTGGAAGGATTCTCCAACATCAATGCTCAATACTTATCATGAACTTATTCGCATGGGATTAAAGATATGGGTGTTCAGTGGTAATACGGACGCGGTAATACCTGTCACATCTACTCGCTATAGCATAAATGCTCTCAATCTCCCTACGGTTAGTCCTTGGCGTGCATGGTATGATGATGGGGAGGCAAGTGATTCTATAATGAGTGTTTTTTTGTATAGTATTTCTAGTGACTTTATTTCTTAG 3198 0.4384 MASDQITMSMPEERGAGGKLRKPPPRKPPPSPYARPVDTRRHRWISKLVNPAYRLIAGGATRLLPSLFSAATPPSPLPSPTSCAEDQANSRLACGNIPNRCRSRTDKEVAGARAREIDSDEKQARICDSQSQCDCPWRRWRVSLLYNLAQLQGYNAKLITIHKASYIWETGDGHEDGSRKSDIHLLAYKSSEMAIADGISGKLTSSSDLVMSRQDDKVEKSDQNRLSDIEQLVKGKKFSRDEFDHLVAVLNSRVMDLSNLEKGKESTNMTQGLPNVSNGQRNEEPIGAIWGTSKPLGLSKVREGLDASPIEIARAYMDSRALEAGPSSKNMIHAVESTVLHGVEAAIKPYDPTPSKKSTTCWPGAVVQDAYTTPQSQRSRYGLHNFPRTPYSKTLLTKSKSKMIHLQGDNNHISSTPILQSKTAMYLQDKSKTVASESVYGSVGPIRRTRHKVGAQSSSRRPVYSSLNGPSLRESSGVVEGFTPVAKCTETIGTGSTHKPLGFPVGAPTVHMHSSLMAKKILDHIDRNVPTPKEKSAELKLATKWKNSESDFSTISSNEDNDLHKLNDVSPHIYDGLERKKSTLLIEGKGNYRVDMQLKDSTNKSINVRNEETLAPDVNSYNSSNPRHDNDDAPTITLPSGGQPYGVNQEKKPPTNPATIKPVLPPISIKKPESRWTVASDNSSGFTFPVSTSSSVFSEPPTPSIMPLFSAGDQQQSKGSTELSYTFGLKKASPALIQGVPVSEWQMAQGGLSESLCIATLLFFTGFATSSSTDSPLLQQQKDKVGTLPGQSFDVGFAHYAGYITVEENSGRTLFYWFIEALEDPLSKPLVLWLNGGAFGTSILVGNALTDDFHDQLGMFEFMWSSGLISDQTYKLLNLLCDNQSVEHPSHSCEQVWEIAYKELGNIDLYSLFTPKCHANISQLSQLARRKHRIGRLGLSAEYDPCTETHSIVYFNQREVQTVLNVDRDHKPARWETCSEVVNTNWKDSPTSMLNTYHELIRMGLKIWVFSGNTDAVIPVTSTRYSINALNLPTVSPWRAWYDDGEASDSIMSVFLYSISSDFIS 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02593 1065 SUPERFAMILY alpha/beta-Hydrolases 785 1044 IPR029058 -
Spst9g02593 1065 MobiDBLite consensus disorder prediction 609 665 - -
Spst9g02593 1065 Gene3D alpha/beta hydrolase 777 841 IPR029058 -
Spst9g02593 1065 Gene3D alpha/beta hydrolase 842 928 IPR029058 -
Spst9g02593 1065 Pfam Serine carboxypeptidase 789 839 IPR001563 GO:0004185|GO:0006508
Spst9g02593 1065 Pfam Serine carboxypeptidase 842 1044 IPR001563 GO:0004185|GO:0006508
Spst9g02593 1065 MobiDBLite consensus disorder prediction 609 631 - -
Spst9g02593 1065 MobiDBLite consensus disorder prediction 1 38 - -
Spst9g02593 1065 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP1 11 776 - -
Spst9g02593 1065 Gene3D - 943 1055 - -
Spst9g02593 1065 MobiDBLite consensus disorder prediction 641 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02593 Spst-Chr9 59886756 59916808 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02593 - - gmx:100789007 791.186