Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02579 ATGGCAGAAAGCTTAACGTGTTCTGTGATATCTCGAAGTAAAAGTGATGTAACAGCGATGAAGGAGACACTTCGTGCCCAGCAGCAACTTCTGGAAAAGCTATATGCTGAGTTGGATGAGGAAAGAGAAGCTTCAGCTACTGCAACGAGTGAAGCACTGGACATGATACTGCGTTTGCAGGGAGAGAAGGCTGTGGTGAAGATGGAGGCAGGTCACTACAAGAGGGTGGCAGAAGAGAAGATAGGCCATGCTGAGGCCTCTCTTGAGGCTTTTGAGGAACTTATGTATCAGAAGGAAATGCTAATTGTGTCTCTCGAATTTCAAGTCCAGGCTTATAGACACAAACTTATGAGCTTGGGGTGTGAACTCAGTGCTAATGAGTTTGAGTTCCCAGAGGATTTGATGCTGAATAAAAGTGATAAAAGAAACGGAGAAAATGGGGAGCAGAGTAGCACCGTTAGAAGGCTACATTCAATGCCCGCAATTCAGTTTCTGAGTTCCTTGAGAGCTGCTACCAGGGAAAGATCACCTAGTCCAGTTCTTGATGTGATTCCTAAGATAGTAGAGGAGGAGAGTACTGACAAGGAAGTAGCTCAAACTAGTTTGGATCTGACAAGAAAGTCAGTTGACTTTTCATGTAGCAGTGGAACTCTTGATTCTTATTTGAACCAGATAAAGGAGTTGAATGAACAAGTGAGGGTCATTTCGGATTGTGCTGAAGGAGAAAAGAGTGCAAATTTGAGTAGTAGAAGAGGAAGGTCCTGTTCAATTATATCACAGGCAAGCATTGAGAGGTTGCTCTCTAATAACACAGACGAAGTGAATCAAGGTGAAAGTTCACATAATGGAGGAGTTGTTAACGATTCTCCTGGCTTGCATAATGTCCATGATGTGTATGAAGTCCCACAAACTAGTGAAAAGCATGGAAAAGGGTTGAATTTGGGTGCAGAGAACAGATTAACAAAACCAGATCCTGTGTCTCAGGGAACGATTGAATCACTTGTCAAACTTGGAGCAGAAAAGAAAAAGGGTATGCTTAAAGTGCATCGTGAAATCAAAACTCCTTCTCCTACAGTTATGATGACTGTGAGTGACCATAAAAAAGAAGTGATGGGTGAGGATTGCAATTCTCAAGCTGAGTTACATAAGCTGATACAGAGAATTGAGAGGCTTGAGAGGGAGAGTGTTAGTGCAAAGCAAGAGATTACTCATGAATATGGTGAAGAGCAGTTGAGGCTGTTAAAGGACATACAAAGTCAACTCCAATCAATACAATCAGAGATAAGAAGCTTGAAAACCAAAAAAACCAGTCCTAAGGACGACCTGTCTTTGGCTTCTCTCCAAGAGGCAATGTTGCACTTCTGGCTTTGA 1371 0.4245 MAESLTCSVISRSKSDVTAMKETLRAQQQLLEKLYAELDEEREASATATSEALDMILRLQGEKAVVKMEAGHYKRVAEEKIGHAEASLEAFEELMYQKEMLIVSLEFQVQAYRHKLMSLGCELSANEFEFPEDLMLNKSDKRNGENGEQSSTVRRLHSMPAIQFLSSLRAATRERSPSPVLDVIPKIVEEESTDKEVAQTSLDLTRKSVDFSCSSGTLDSYLNQIKELNEQVRVISDCAEGEKSANLSSRRGRSCSIISQASIERLLSNNTDEVNQGESSHNGGVVNDSPGLHNVHDVYEVPQTSEKHGKGLNLGAENRLTKPDPVSQGTIESLVKLGAEKKKGMLKVHREIKTPSPTVMMTVSDHKKEVMGEDCNSQAELHKLIQRIERLERESVSAKQEITHEYGEEQLRLLKDIQSQLQSIQSEIRSLKTKKTSPKDDLSLASLQEAMLHFWL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02579 456 ProSiteProfiles GTD-binding domain profile. 15 113 IPR007656 -
Spst9g02579 456 MobiDBLite consensus disorder prediction 271 327 - -
Spst9g02579 456 Pfam Zein-binding 19 109 IPR007656 -
Spst9g02579 456 Coils Coil 381 401 - -
Spst9g02579 456 Coils Coil 74 94 - -
Spst9g02579 456 MobiDBLite consensus disorder prediction 271 287 - -
Spst9g02579 456 Coils Coil 414 434 - -
Spst9g02579 456 Coils Coil 17 51 - -
Spst9g02579 456 PANTHER BNAANNG28530D PROTEIN 13 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02579 Spst-Chr9 59755537 59757151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02579 - - vra:106757166 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02579 9 59755537 59757151 Spst9g02579 9 59755537 59757151 ECH