Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02498 ATGGTTGCAACAGCAGTGTCGGCGTCGTTTATCCCTGTCGTCCCTTCGCCGGACTCTGGGAAAGGGAAGCATCTGGGTGACAGCTCTGCAAACTTGAGAGGACTCAAACCAAGACATGGTTTATGTGGTGGCTTGCAGGTGAAGGCAAATGCACAGGCCCCTCCGAAGGTTAACACCACCGTGAAGGTTGAGGAGGATTTGCCATCATCGTCGTCACTTTCTCATGCTCCCAGGACTTTCATCAACCAGTTACCGGACTGGAGCATGCTTCTCGCCGCCATCACCACCGCCTTCCTCGCCGCGGAGAAGCAGTGGATGATGCTTGATTGGAAGCCGCGCCGCCCCGACATGCTCGTGGATCCCTTTGGGATTGGAAAGATCGTGGAGGACGGGCTTGTGTTCAGACAGAACTTCTCAATTCGGTCCTACGAAATTGGCGCCGACAAAACTGCGTCTATAGAGACGTTGATGAATCATTTGCAGGAGACAGCACTTAATCATGTTAAGACTGCGGGGCTTCTTGGTGATGGTTTTGGCTCCACGCCTGAAATGTGTAAGAAGAACTTGATATGGGTGGTTACTAAGATGCAGGTTGTGGTTGATCGGTATCCTAAATGGGGTGATGTTGTTCAAGTGGACACTTGGGTTTCCGCATCTGGGAAGAATGGTATGCGTCGTGATTGGCTTGTGCGTGATACCCAAACGGGTGAGATCTTGACAAGAGCCTCCAGTGTTTGGGTCATGATGAATAAAGTGACAAGGAGACTGTCCAAAATTCCCGAAGAAGTCAGAGGAGAGATAGGGACTTATTTTGTTGATTCTGCTCCAGTTGTGGAAGAGGATAAAAGAAAACTATCCAAACTTGATGATTCAGCTAATTTCATTCGCACTGGTTTAAGTCCCAGATGGAATGATCTAGATGTTAACCAGCATGTTAACAATGTGAAGTACATTGGGTGGATTCTGGAGAGTGCTCCACAGCCACTTTTGGAGAGTCATGAGTTGTGTGCCATGACTTTGGAGTACAGAAGGGAGTGTGGCAGGAACAGTGTGCTGGATTCCCTGACTGATATCTCTGGTGCTGATGTAGGCAGTTTAGCTGACGGTGGATTTGTTGAGTGCAAACACTTGCTTCGACATGAAGATGGTGCTGAAATTGTGAGGGGTAGAACTGAATGGAGGACCAAATCAGCAAAGAACTTAAGCGTTTTGAATCAGGTTCCAGCAGAAAGCACCTGA 1239 0.4859 MVATAVSASFIPVVPSPDSGKGKHLGDSSANLRGLKPRHGLCGGLQVKANAQAPPKVNTTVKVEEDLPSSSSLSHAPRTFINQLPDWSMLLAAITTAFLAAEKQWMMLDWKPRRPDMLVDPFGIGKIVEDGLVFRQNFSIRSYEIGADKTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTKMQVVVDRYPKWGDVVQVDTWVSASGKNGMRRDWLVRDTQTGEILTRASSVWVMMNKVTRRLSKIPEEVRGEIGTYFVDSAPVVEEDKRKLSKLDDSANFIRTGLSPRWNDLDVNQHVNNVKYIGWILESAPQPLLESHELCAMTLEYRRECGRNSVLDSLTDISGADVGSLADGGFVECKHLLRHEDGAEIVRGRTEWRTKSAKNLSVLNQVPAEST 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02498 412 Gene3D Hotdog Thioesterase 124 400 - -
Spst9g02498 412 CDD 4HBT 134 250 - -
Spst9g02498 412 FunFam Acyl-[acyl-carrier-protein] hydrolase 125 399 - -
Spst9g02498 412 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 128 280 IPR029069 -
Spst9g02498 412 Pfam Acyl-ACP thioesterase 131 394 IPR002864 GO:0006633|GO:0016790
Spst9g02498 412 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 48 398 IPR045023 GO:0006633|GO:0016297
Spst9g02498 412 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 292 393 IPR029069 -
Spst9g02498 412 Pfam Acyl-ATP thioesterase 1 120 IPR021113 GO:0016790
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02498 Spst-Chr9 58792621 58795767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02498 19 397 Acyl Lipid Metabolism Gene Families AT1G08510 73.779 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02498 K10781 - gmx:100781381 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02498 9 58792621 58795767 Spst9g02498 9 58792621 58795767 ECH