Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02390 ATGCTTATTGAAATTCATCGAATCAGGACCATAGGATTAGTTGATCATTGGGAAAATAACACACTACATTATGTTTATGAGCTTGTGCAGAATGGCAATGCTGCGTTTCGAGAGAACAGAATGGAAGAGGCAATCAACTATTACTCAAGAGCCAATAACATCAAATCAGGTGATCCAATCATCCTCAGCAATCGAAGTGCAGCTTATATTAGGATTAGCCAATATTTCATGCGCAGAGCACCATCATCTTCGGAATGTAGGCCATTGAGTGGGCTTGAACCCACAACACTTGGTGAACTGGCTTTGAAGGATGCTGAGAAGCTTGTTGAACTTCAAAGTAATTCAGCAAAATCATATATTTTAAAGGCCAATGCTCTTCTCCTGTTAGAGAAATATGAAAAAGCCCGGGATGTTATTCTTTCAGGCCTTCAAGTTGATCCTTTTAGCAATTCTCTTCGGGCTTTGCTTCAAAATTTGGAAAGAGTTTCATCTAGCTCAACAGGGATGAGTACACATGGACAACCAGAACGTAATGATGATTTTGATTGCACTCTTTGCCTGAAGTTACTGTACGAACCTAACTTTCCCGAGGAATATGCTGAAAGAAAGCAAGAGCAGGATGGTTTAATCAATGCTGGTGTTGATTTACTCCCTCTTTTTGTCATGGATGTTGTCATACCATGTCAAAGGTTTCCACTCAATATATTTGAACCTCGGTATAGACTCATGGTAAGAAGAATAATGGAAGGCAATCATCGAATGGGAATGGCTATACTTGATTCTTCAACAGGTTCCTTAGCTGAGTTTGCCTGTGAAGTGGAAATCACCGAGTGTGAACCACTTCCCGATGGTCGTTTTTATATAGAGATTGAAAGTCGTAGGAGATTTCGTATCATCCGTTCGGGGGATCAAGATGGGTATCGCGTTGCAGAGGTTGAATGGATACAGGATGTTATGCCACCGGAAGGGACAACTGAAAGAGAGACTTTACAGGAATTGACATATAATGCAGCCGAAAGTGCTCGATCATGGATAGGAAGAGCTAAAGAAGCAGCAGGACATGATCAAAGAAAACTTGAGAGACTCGCCAGTGTTGAAGTAATGATGCCTTCATTAAAAGACCCCGAGCGCTTTAGTTTTTGGCTGGCTACCCTCTCCAACAGGAGGCCTGCGGAAAGATTAGATCTCCTACGCATCAGAGATACAACCGAGTTCCATTTGTATACATTTATTACTGAAACAAAAGGTGATATGGGCGACATACTGTTATATTAG 1275 0.4133 MLIEIHRIRTIGLVDHWENNTLHYVYELVQNGNAAFRENRMEEAINYYSRANNIKSGDPIILSNRSAAYIRISQYFMRRAPSSSECRPLSGLEPTTLGELALKDAEKLVELQSNSAKSYILKANALLLLEKYEKARDVILSGLQVDPFSNSLRALLQNLERVSSSSTGMSTHGQPERNDDFDCTLCLKLLYEPNFPEEYAERKQEQDGLINAGVDLLPLFVMDVVIPCQRFPLNIFEPRYRLMVRRIMEGNHRMGMAILDSSTGSLAEFACEVEITECEPLPDGRFYIEIESRRRFRIIRSGDQDGYRVAEVEWIQDVMPPEGTTERETLQELTYNAAESARSWIGRAKEAAGHDQRKLERLASVEVMMPSLKDPERFSFWLATLSNRRPAERLDLLRIRDTTEFHLYTFITETKGDMGDILLY 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02390 424 PANTHER RING FINGER PROTEIN 127 194 404 - -
Spst9g02390 424 SUPERFAMILY PUA domain-like 217 403 IPR015947 -
Spst9g02390 424 SMART tpr_5 25 58 IPR019734 GO:0005515
Spst9g02390 424 SMART tpr_5 116 149 IPR019734 GO:0005515
Spst9g02390 424 SUPERFAMILY TPR-like 24 156 IPR011990 GO:0005515
Spst9g02390 424 ProSiteProfiles Lon N-terminal domain profile. 214 415 IPR003111 -
Spst9g02390 424 Gene3D - 215 317 IPR046336 -
Spst9g02390 424 Gene3D Tetratricopeptide repeat domain 23 180 IPR011990 GO:0005515
Spst9g02390 424 SMART lon_5 216 416 IPR003111 -
Spst9g02390 424 Pfam ATP-dependent protease La (LON) substrate-binding domain 217 402 IPR003111 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02390 - - gmx:100802277 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02390 9 56687841 56699389 Spst9g02390 9 56687841 56699389 ECH