Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02339 ATGGGAGCTGGAAGTTTCCTGAAGGTGGTTCTGAAAAATTTTGATGTTCTTGCTGGGCCTGTGCTTAGTCTGGCGTATCCTCTATATGCCTCGGTTAGGGCAATTGAGAGCAAGTCTCCTGTTGATGACCAGCAATGGCTAACTTATTGGGTTCTATATTCCTTGATCACCCTCTTTGAACTTACTTTTGCCAAAGCTCTTGAATGGATTCCCATTTGGCCATATGCAAAGCTAATCCTTACCAGCTGGTTGGTTATTCCCTACTTCAGTGGTGCAGCCTATGTTTATGAGCACTATGTTAGACCTTTCTTTGTCAATTCTCAAAACGTTAACATCTGGTATGTTCCAAGCAAAAAGGATTCTTTGGGGAAGCCAGAGGACATGCTAACTGCAGCTGAGAAGTACATTGAAGAGCATGGAACTGAAGCATTTGAGAATCTGCTTAGCAAGGCTGGTAAATCTAGGAAAAGTAGCAAGCATGCAAATGGAAGCCATTGA 498 0.4297 MGAGSFLKVVLKNFDVLAGPVLSLAYPLYASVRAIESKSPVDDQQWLTYWVLYSLITLFELTFAKALEWIPIWPYAKLILTSWLVIPYFSGAAYVYEHYVRPFFVNSQNVNIWYVPSKKDSLGKPEDMLTAAEKYIEEHGTEAFENLLSKAGKSRKSSKHANGSH 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02339 165 PANTHER HVA22-LIKE PROTEINS 20 139 IPR004345 -
Spst9g02339 165 Pfam TB2/DP1, HVA22 family 27 103 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02339 Spst-Chr9 54968136 54970103 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02339 K17279 - gmx:100527841 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04686 3 98668721 98670095 Spst9g02339 9 54968136 54970103 ECH
Spst9g02339 9 54968136 54970103 Spst9g02339 9 54968136 54970103 ECH