Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02314 ATGGCTGAATCAGTGCATTCAATGAACAACACTGCCCAAAAGTTGGCCGGTAAAGTTGCCATAATCACCGGCGGAGCCAGCGGCATCGGCGAAGAGGCGGCGCGTCTGTTTGCCAACCACGGTGCTCGAATGGTGGTGATTGCAGACATCCAAGATCATCTCGGCCACCAAGTCGCAGCATCCATTGGCTCTCATAGGTGCACCTATGTCCGTTGTGACGTGACGGAGGAAGAACAAGTGAAGAGCCTCGTGGATTCTACGGTCAACGCTTATGGCCAATTGGACGTGCTGTTCAGCAACGCCGGCATCATCAGTCCCTCCAACCAGAAACTCCTCGACCTCGACTTTCCCCAATTCGACCGTCTCTTCGCCGTCAACACGCGAGGCATGGCGGCGTGTGTAAAGCACGCCGCGCGCGCGATGGTGGAGCGGCGCGTGAGGGGCAGCATCGTGTGCACGGCGAGCGTGGCGGCGTCGCACGGCTGCATGCAGTACACGGACTACGTGATGTCGAAGCACGCAGTGAAGGGGCTGGTGCGTGCGGCGAGTATGCAGCTGGGGGCGCACAGTATTAGGGTGAACTGCGTCTCACCGAGTGGGTTGGCCACGCCGTTGACCCGTGCGGCGCACCCGACGATGGAGATCGAAGAATTGCAGAAAATGTATGCACAGAGCTGCAGGCTGAAAGGCGTCTTTTTGACCGCCAAACATGTCGCTGATGCTGTGCTGTTTCTGGCGTCCGGTGACTCGGAGTTTGTAACCGGACTCGATCTTGTGGTGGATGGTAGTTTTGAGCTTTGA 801 0.5793 MAESVHSMNNTAQKLAGKVAIITGGASGIGEEAARLFANHGARMVVIADIQDHLGHQVAASIGSHRCTYVRCDVTEEEQVKSLVDSTVNAYGQLDVLFSNAGIISPSNQKLLDLDFPQFDRLFAVNTRGMAACVKHAARAMVERRVRGSIVCTASVAASHGCMQYTDYVMSKHAVKGLVRAASMQLGAHSIRVNCVSPSGLATPLTRAAHPTMEIEELQKMYAQSCRLKGVFLTAKHVADAVLFLASGDSEFVTGLDLVVDGSFEL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02314 266 Gene3D - 4 265 - -
Spst9g02314 266 Pfam Enoyl-(Acyl carrier protein) reductase 24 262 - -
Spst9g02314 266 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 262 IPR036291 -
Spst9g02314 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Spst9g02314 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
Spst9g02314 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 IPR002347 -
Spst9g02314 266 FunFam Short-chain dehydrogenase reductase 6 266 - -
Spst9g02314 266 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 155 183 IPR020904 GO:0016491
Spst9g02314 266 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 8 265 - -
Spst9g02314 266 PRINTS Glucose/ribitol dehydrogenase family signature 228 248 IPR002347 -
Spst9g02314 266 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Spst9g02314 266 PRINTS Glucose/ribitol dehydrogenase family signature 189 206 IPR002347 -
Spst9g02314 266 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Spst9g02314 266 PRINTS Glucose/ribitol dehydrogenase family signature 92 103 IPR002347 -
Spst9g02314 266 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02314 Spst-Chr9 54357901 54362400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02314 14 261 Acyl Lipid Metabolism Gene Families AT3G55290 26.667 5.96e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02314 - - gmx:100817513 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02314 9 54357901 54362400 Spst9g02314 9 54357901 54362400 ECH