Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02299 ATGAAGCAAAAGCTCGAAACGTTGTTTTGTTTAACAAGAAAACGATCGATTCAGTTTCTGATCGGTGCGTTTTTCTTGTACCTCGTACTCGTCACACTCGAAATCCCTATCGTTTTCAAAACCGACTTCACCACCGTAGCCACGCGCCCTCCGAGACTCCTAAGCGAGGAAGACTCGCAACTAAAGGAATCCCCTGCGCGTCCTTTGAAAACAGTTTCCAACGCCGCCTCGCCGAGTCAACTCGCTCGCCGCAGCCTCGTTTCCGCGTTGGTCCTAAACGACGCCGCGTTCGAATCTAACGGCAACGATGGGTCGTTGGAGCTTTACAAGCTCGTAAAGCACGCGCGGCAGGTTGGACAGAATCTCTGGGAGGACCTCGAATCTGGAAAGTGGCGGACCATTGTCTCGAGGCCCGAGAACCGGTCCGGTTCGTGTCCCGGTTCGGTTTCTCTGGCCGGTTCGGACATCTCAGGTGTCGTACCGCTGCCGTGTGGGCTCACATTGGGGTCCCACGTGACGGTAGTTGGGAAGCCGTTGGCGGCGCGGCCGGATTTCGAGCCGAAGATAGCTGTGGTGGCGGAGGATGAAGCGGTGATGGTATCGCAGTTCGTGGTGGAGTTGCAGGGGCTGAAGACGGTGGACGGTGAAGAGCCTCCTAGGGTTTTTCACTTCAACCCGAGGTTGAAGGGGGATTGGAGTGGGAAGCCTGTGATTGAACTCAACACATGTTATCGCATGCAATGGGGTTCCGCTCTTAGGTGCGACGGTTGGAAATCCAAGGCCGATGAAGATACCGTTGATAGGATGGTGAAGTGCGAGAAGTGGATTAGGGATGATGAAGATCACTTAGAGGAGTCTAAGTCGTCGTGGTGGTTGAAAAGACTGATAGGGCGCACCAAGAAAGTAAATTTTGATTGGCCATTCCCGTTTTCTGAGGGGAAGCTATTTGTTCTTACCATTAGTGCTGGGTTGGAGGGGTATCATGTTACTGTTGATGGGAGACATGTGACATCTTTTCCTTATCGCACTGGTTTTACACTCGAGGATGCCACTGGGCTTTCGTTGACAGGAGACATTGATGTCCACTCTGTATTTGCAGCGTCTTTGCCTTCATCGCATCCCAGTTTTGCCCCGCAGCGGCACCTTGAATTTTCCACCAGGTGGCGTGCCCAGCCACTTCCTGACTCTGGGGTAGAATTGTTCATCGGTGTCCTCTCAGCTGGAAACCATTTTTCTGAGCGAATGGCGGTGAGAAAGTCATGGATGCAGCATAGGCTTGTCAAATCTGGAGCAGCGGTCGCACGTTTCTTTGTTGCACTGCATGCAAGACAAGAAATTAATGTAGAGTTGAGGAAGGAAGCAGAATTTTTTGGTGATATTGTTATAGTGCCTTACTTGGATAACTATGACCTTGTTGTGTTGAAAACAGTGGCCATATGTGAATATGGGGTTCATACGATTTCTGCTAAGTATATCATGAAAGGTGACGATGATACTTTTGTTAGAGTGGATGCCGTTATCAGTGAAGCGAGGAAGGTTCCAGATGATATCAGCTTTTATATTGGGAACATAAATTACTATCATAAACCCTTGCGATATGGGAAATGGGCAGTGACATATGAAGAATGGCCAGAAGAGGATTACCCACCCTATGCTAATGGCCCGGGTTATATTTTGTCATCAGATATTGCCCGATATATTGTATCTGAATTTGAAATGCATAAATTAAGGTTGTTTAAGATGGAAGATGTGAGTATGGGAATGTGGGTAGAGCAATTTAACAGCTTAAAACCAGTTCACTACTCTCATAGCTTGAAGTTCTGCCAATTTGGTTGCATAGAAGACTATTACACGGCCCATTATCAATCGCCTAGGCAGATGATGTGCCTCTCGGGATTGGATGTGATGATAAAGGGGGAGAGGTGGGAGGGGGAGTATATTGATGCAGATACAAGTTCTGTAAAATCATTTGAGGGATAG 1980 0.4843 MKQKLETLFCLTRKRSIQFLIGAFFLYLVLVTLEIPIVFKTDFTTVATRPPRLLSEEDSQLKESPARPLKTVSNAASPSQLARRSLVSALVLNDAAFESNGNDGSLELYKLVKHARQVGQNLWEDLESGKWRTIVSRPENRSGSCPGSVSLAGSDISGVVPLPCGLTLGSHVTVVGKPLAARPDFEPKIAVVAEDEAVMVSQFVVELQGLKTVDGEEPPRVFHFNPRLKGDWSGKPVIELNTCYRMQWGSALRCDGWKSKADEDTVDRMVKCEKWIRDDEDHLEESKSSWWLKRLIGRTKKVNFDWPFPFSEGKLFVLTISAGLEGYHVTVDGRHVTSFPYRTGFTLEDATGLSLTGDIDVHSVFAASLPSSHPSFAPQRHLEFSTRWRAQPLPDSGVELFIGVLSAGNHFSERMAVRKSWMQHRLVKSGAAVARFFVALHARQEINVELRKEAEFFGDIVIVPYLDNYDLVVLKTVAICEYGVHTISAKYIMKGDDDTFVRVDAVISEARKVPDDISFYIGNINYYHKPLRYGKWAVTYEEWPEEDYPPYANGPGYILSSDIARYIVSEFEMHKLRLFKMEDVSMGMWVEQFNSLKPVHYSHSLKFCQFGCIEDYYTAHYQSPRQMMCLSGLDVMIKGERWEGEYIDADTSSVKSFEG 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02299 659 FunFam Hydroxyproline O-galactosyltransferase 391 633 - -
Spst9g02299 659 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 158 367 IPR001079 GO:0030246
Spst9g02299 659 FunFam Hydroxyproline O-galactosyltransferase GALT4 157 274 - -
Spst9g02299 659 Gene3D - 394 631 - -
Spst9g02299 659 SUPERFAMILY Concanavalin A-like lectins/glucanases 159 365 IPR013320 -
Spst9g02299 659 FunFam Hydroxyproline O-galactosyltransferase GALT2 281 365 - -
Spst9g02299 659 CDD GLECT 159 365 IPR001079 GO:0030246
Spst9g02299 659 SMART Gal_bind_lectin_2 162 366 IPR001079 GO:0030246
Spst9g02299 659 Pfam Galactosyltransferase 413 593 IPR002659 GO:0006486|GO:0016020|GO:0016758
Spst9g02299 659 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 335 599 IPR002659 GO:0006486|GO:0016020|GO:0016758
Spst9g02299 659 Pfam Galactoside-binding lectin 160 365 IPR001079 GO:0030246
Spst9g02299 659 MobiDBLite consensus disorder prediction 54 74 - -
Spst9g02299 659 Gene3D - 154 365 - -
Spst9g02299 659 SMART galectin_3 156 367 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02299 Spst-Chr9 53823408 53826806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02299 4 630 Glycosyltransferase AT1G74800 62.980 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02299 K20843 - gmx:100816777 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02299 9 53823408 53826806 Spst9g02299 9 53823408 53826806 ECH