Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02273 ATGAACCTTCAAGTTCCCGCCATTTTTCTTATCTTCATTTTCTCCATCCCTTCATCCACCGCCACCGCCGGTGTCGACGCCATTTCCCGCCTTATTCAGATCCAAGACCGCGAGAGGGCTCCCCCTTCCGTCCAGGAAGCTGCCGCGCGCGGCGTCCTCCTCCGCCTGTTGCCTTCTCACTCTTCCAGCTTCCACTTCCGGATCGTCTCCAAGGAATACCTATCTATTCTCTTATCATTACTGTGGCCTACAAAGCAATGCGGTGGTGAATATTGCTTCGTGATAAAAAATCATCCTTCTTTGGCGATACCAGGGGATTCTCAAATTCTGATTGAAGGCACAACTGGAGTGGACATAGTGTCGGGTCTGCACTGGTATCTGAAGCATTGGTGCGGTTCACACATATCATGGGACAAAACCGGTGGCTCGCAGCTATTTTCCGTACCCAATGCGGGCATTCTCCCGCGCGTTCACCACGCTGCAGGGGTCTCTGTTCAGAGGCCTATTCCGTGGAGCTATTACCAAAATGCGGTTACTTCTAGCTATTCCTTCGCTTGGTGGGACTGGGAAAGATGGGAAAAGGAAATTGACTGGATGGCTCTGCAGGGAGTTAACTTGCCGCTTGCGTTTACGGGACAAGAGGCTATCTGGCAGAAAGTGTTCCAGCTTGATTTAGGCCTTGATTCTCAAGCTGACTTTATATTGAACCTCCAGGAGAAATTTAACATGAGTATTTCTGATTTGGATGATTTCTTTGGAGGTCCCGCATTTCTTGCTTGGTCACGCATGGGGAATTTACATGGATGGGGTGGACCACTGCCACAGAGCTGGTTTGATCAACAATTAATCTTACAGAAGAAAATTCTCGCCAGAATGTATGAGCTTGGAATGACACCAGTTCTGCCAGCATTTTCTGGAAATGTCCCTGCTGCGCTGAAATTTATATTTCCTTCAGCAAAAATAACACGCTTAGGAAATTGGTTTTCTGTAAAGAATGACCTTAAATGGTGCTGCACCTATCTTCTTGATGCTACTGATTCTTTGTTCATCGAGATTGGGAGAGCATTCATAGAGAAACAACTACAAGAGTATGGAAGAACCAGCCACATATACAACTGTGATACTTTTGACGAGAACACCCCACCAATTGATGATCCAGAGTACATTTCATCATTAGGTGCAGCAATTTTTAAAGGAATGCAGAGTGGTGATGATGATGCTGTTTGGCTGATGCAGGGATGGCTGTTTTCATATGATCCATTCTGGAGACCTCCTCAAATGAAGGCACTTTTACATTCTGTTCCTGTTGGAAAGCTGGTGGTTCTTGACCTATTTGCTGAAGTTGGAGTTGGAATGTCCATGGAAGGTATTGAACAGAATCCCATTGTCTATGACTTGATGTCTGAAATGGCATTTCAGCACAAGAAAATTGATGTTAAGGCCTGGGTTGACATGTATTCAACTCGACGATATGGACAACGACTTCCTTTAATACAGGAGGGATGGAATGTCTTATATCACACGATTTACAATTGCACTGATGGAGCCTATGACAAAAACAGAGATGTGATCGTAGCATTCCCAGATGTTGACCCTTCCTTAATTTCAGTACAGCATGATCGGTCTCACCACTATGACAAGCCCTCGGGAACAATTATCAAAGAAATAACCGATCAATTTGATCGACCACATTTATGGTATTCAACTTCTGAAGTAATCTATGCACTAGAGTTATTTATAACTAGTGGAGATGAACTTTCAAGAAGTAATACTTACAGGTATGACTTAGTTGATCTGACTAGACAAGTCCTGGCAAAATATGCAAATGAATTGTTCTTTAAAGTCATCGAGGCATATAAATCACATGACGTCCATGGAATGACCCTTCTCAGCCAGAGATTTCTGAACCTAGTGGAAGATTTGGACACACTTTTGGCTTGCCATGATGGGTTTCTTCTGGGACCTTGGTTACAAAGTGCAAAGCAACTAGCTCAAGATGAAGAACAGGAGAGACAGTTTGAGTGGAATTCTAGAACACAAATCACCATGTGGTTTGACAACACAAAGGAGGAAGCCAGTCTGCTTCGTGATTATGGAAACAAGTACTGGAGCGGGCTTCTACATGATTACTATGGCCCCAGAGCTGCTATTTATTTTAAATATTTAAGAGAAAGCTTAGAGATAAGTGAAAATTTCAAGCTAATAGAATGGAGGAGGGAGTGGATAAAGCTTACTAATGAATGGCAAAAGAGTAGGAATATTTTTCCAGTGGAAAGTAAAGGAGATGCTTTAAACACTTCTCGGTGGCTCTTTAACAAATACCTGAACATGACCAATCCTGAAGCAAAGCTTCTACAGGAGTACTGA 2367 0.4343 MNLQVPAIFLIFIFSIPSSTATAGVDAISRLIQIQDRERAPPSVQEAAARGVLLRLLPSHSSSFHFRIVSKEYLSILLSLLWPTKQCGGEYCFVIKNHPSLAIPGDSQILIEGTTGVDIVSGLHWYLKHWCGSHISWDKTGGSQLFSVPNAGILPRVHHAAGVSVQRPIPWSYYQNAVTSSYSFAWWDWERWEKEIDWMALQGVNLPLAFTGQEAIWQKVFQLDLGLDSQADFILNLQEKFNMSISDLDDFFGGPAFLAWSRMGNLHGWGGPLPQSWFDQQLILQKKILARMYELGMTPVLPAFSGNVPAALKFIFPSAKITRLGNWFSVKNDLKWCCTYLLDATDSLFIEIGRAFIEKQLQEYGRTSHIYNCDTFDENTPPIDDPEYISSLGAAIFKGMQSGDDDAVWLMQGWLFSYDPFWRPPQMKALLHSVPVGKLVVLDLFAEVGVGMSMEGIEQNPIVYDLMSEMAFQHKKIDVKAWVDMYSTRRYGQRLPLIQEGWNVLYHTIYNCTDGAYDKNRDVIVAFPDVDPSLISVQHDRSHHYDKPSGTIIKEITDQFDRPHLWYSTSEVIYALELFITSGDELSRSNTYRYDLVDLTRQVLAKYANELFFKVIEAYKSHDVHGMTLLSQRFLNLVEDLDTLLACHDGFLLGPWLQSAKQLAQDEEQERQFEWNSRTQITMWFDNTKEEASLLRDYGNKYWSGLLHDYYGPRAAIYFKYLRESLEISENFKLIEWRREWIKLTNEWQKSRNIFPVESKGDALNTSRWLFNKYLNMTNPEAKLLQEY 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02273 788 Gene3D - 19 161 IPR029018 -
Spst9g02273 788 Gene3D Glycosidases 448 474 - -
Spst9g02273 788 Gene3D Glycosidases 168 447 - -
Spst9g02273 788 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 173 447 IPR024733 -
Spst9g02273 788 Pfam Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 47 151 IPR024240 -
Spst9g02273 788 Pfam Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 482 773 IPR024732 -
Spst9g02273 788 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 8 448 IPR007781 -
Spst9g02273 788 Gene3D - 476 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02273 Spst-Chr9 53191287 53201967 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02273 K01205 - gmx:100791160 1397.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02273 9 53191287 53201967 Spst9g02273 9 53191287 53201967 ECH