Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02213 ATGGCAAAACAGTCATCTGAACTGGCCATTGCAGAACTGAAGAAGCTTCTCAGAGAGAAGGAGGAACTTAACGCAGGGGCAGCTGAAAAAATTGAAGAAGTTGTAGCTGTGTTGAACAAATGTCCTCCTACATATGACCCTGCTTTCCAAAGAATCATTCTCGGATTCACTGACTTCAAGATCAACAATTTCGACAAAAATCCGGATCTGTACTACCAACTTGCCAATGGGCAAAGCCCTCAGTATCTGGTGATTGCTTGCTCCGACTCTCGAGTCAGTCCTTCCGTTATCCTCAACTTTCAACCTGGAGAAGCTTTCATGGTCCGCAACATCGCCAACATGGTCCCTCCATTTAATCAGATAAGGCACAGTGGAATTGGTGCAGCCATTGAGTATGCTATCACGGCTTTGAAGGTACAAAACATTCTGGTTGTTGCACACAGTCGCTGCGGTGGAATCGAAAGGCTAATGAGTCATCCTGAGGATGGTTCTGCCCCCTTTGACTTCATAGATGATTGGGTGAAAATTGGCTTGCCAGCTAAACTCAAGGTTCTGAAAGAATATGAAGGCTATGACTTCAAAGAACAGTGCAGATTCTGTGAAAAGGAGTCAGTGAATAACTCATTAGTGAACCTGAGAACATATCCATATGTTGAAAGCGGAGTAAGGAACAAGAGCATAGAGCTGTTGGGGGGTTACTATGATTTTGTGAAGGGAGAATTCTCGCTTTGGAAGCATGAGTCTTACATCACTGAACCCATTACCATCCCTCTCCCAACGCATCATCACTCAAACTTGGCACTTTGA 807 0.4449 MAKQSSELAIAELKKLLREKEELNAGAAEKIEEVVAVLNKCPPTYDPAFQRIILGFTDFKINNFDKNPDLYYQLANGQSPQYLVIACSDSRVSPSVILNFQPGEAFMVRNIANMVPPFNQIRHSGIGAAIEYAITALKVQNILVVAHSRCGGIERLMSHPEDGSAPFDFIDDWVKIGLPAKLKVLKEYEGYDFKEQCRFCEKESVNNSLVNLRTYPYVESGVRNKSIELLGGYYDFVKGEFSLWKHESYITEPITIPLPTHHHSNLAL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02213 268 SMART Pro_CA_2 75 245 IPR001765 GO:0004089|GO:0008270
Spst9g02213 268 Coils Coil 3 33 - -
Spst9g02213 268 CDD beta_CA_cladeB 55 244 IPR045066 GO:0004089|GO:0008270
Spst9g02213 268 FunFam Carbonic anhydrase 44 252 - -
Spst9g02213 268 PANTHER CARBONIC ANHYDRASE 29 247 IPR001765 GO:0004089|GO:0008270
Spst9g02213 268 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 87 94 IPR015892 GO:0004089|GO:0008270|GO:0015976
Spst9g02213 268 Gene3D Carbonic anhydrase 42 256 IPR036874 GO:0004089|GO:0008270
Spst9g02213 268 SUPERFAMILY beta-carbonic anhydrase, cab 40 254 IPR036874 GO:0004089|GO:0008270
Spst9g02213 268 Pfam Carbonic anhydrase 82 240 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02213 Spst-Chr9 49559291 49564523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02213 K01673 - gmx:547671 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02213 9 49559291 49564523 Spst9g02213 9 49559291 49564523 ECH