Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02199 ATGGCTGGTTCTGTAGAAGGGGAACAGCAACAAAAACAAGTTCTTGGACTTATCGAAGAGCAGAAATTGCAGACGCAGGAGAGTGAGAACAACCATAACACCACAGGCACGCAATTGGAGAGTGGTGAAGGGGAGAGAGAGATGACTCCTACGGCTGCCAGTTCCATGCACAGGTCGGGTTCGAGGCCTCAACTTGATGTCAGCAAAGCAGAGATTCAAGGCAATGAGGAGGAGAAGTATCCCACCATTTTGTTGCCTAATCAATCAGATGATTTATCTCACCTAGCACTTGACATTGGAGGATCCCTGATAAAGTTGGTGTACTTTTCAAGACATGAAGACCAATCAGCCGATGATAAAAGGAAGAGAAGTATGAAGGAGCGGCTAGGGCTTTCTAATGGTAACAGGAGAAGCTACCCTATTCTTGGTGGAAGGCTTCACTTTGTGAAGTTTGAAACTAGAAAGATTAATGAATGCTTGGATTTCATTCATTCAAAGCAGCTTCACTGGTTGGAGTCACATTACTCTGATGGTGTGACTGACCAGAATGGCATAATTAAGGCTACTGGTGGTGGAGCATACAAGTACGCTGACCTTTTCAAAGAAAGACTTGGGGTTAGTCTTGACAAAGAAGATGAAATGGATTGTCTTGTGGCAGGAGCTAACTTCTTGCTAAAGGCAATCCGTCATGAAGCTTTCACACACATGGAGGGCCACAAAGAGTTTGTTCAAATTGAGCCTAATGATCTATTCCCTTATCTTCTTGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGAGATGGAAAATTTGAGAGGGTTAGTGGGACAAATGTTGGGGGCGGTACTTATTGGGGCTTGGGAAGACTGTTAACAAAGTGCAAGAGTTTTGATGAGTTGCTTGAACTGAGTCAGAAAGGAGATAATAGAAGTATGGACATGCTAGTTGGGGACATTTATGGGGGTTTGGACTATTCTAAGATTGGCCTATCAGCTTCCACTATTGCTTCAAGTTTTGGCAAAACAATATCAGAAAAAAAGGAGCTTGAAGAATACAGACCTGAAGATATATCACTTTCTCTTCTAAGGATGATTTCATACAATATTGGCCAGATAGCTTACTTGAACGCATTGCGATTTCGGTTGAAGCGAATCTTTTTTGGTGGATTTTTTATAAGGGGTCATGCCTATACCATGGACACTATTTCTTTTGCTGTACATTTCTGGTCTAATGGAGAAGCACAAGCAATGTTCTTGCGACATGAAGGATTTCTGGGAGCTTTAGGTGCATTTATGAGTTATGAGAAGCATGGTTTAGATGACCTCATGGTGCATCACTTGGTGGAAAGATTTCCAATAGGTGCTCCTTATACCGGAGGCAAGATTCATGGCCCACCACTTGGAGATTTAAATGAGAAGGCAAGTGATAGGGATTGGAAGTTTCTAACATATGCCGTGATTTCATGGATGGAGAAGTTTTTGCAGAAGGGAACTGAGATTACTGCACCTGTGCCAATGACTCCACTTGCTGGAACTACTGGACTTGGGGGTTTTGAGGTTCCTTTGTCAAAAGGAAGTACTCTGCGATCTGATGCAAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTACCAACATTGGAGGTGTTTCCATTACTAGCAGACCCAAAATTGTATGAGCCTAATACGATTGACCTATCAGATAACAGTGAACTAAAATATTGGCTCACCATTTTATCTGAGCATTTGTCAGATCTTGTAGACAAGGCGGTAGCAAGTGAAGGTGGAGCTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCCCGTGCATTTTCAGCCCACTTGGCAAGGTTGATGGAGGAGCCTTCCGCATATGGGAAGTTAGGCCTTGCCAATCTCTTGGAAATGAGGGAAGAATGCTTGAGGGAATTCCAGTTTGTTGATGCCTACAGAAGTATAAAGCAGAGGGAAAATGAGGCATCTCTCGCTGTTTTACCTGACTTGCTGGCGGAACTTGATAGTATGGATGAGGAATCAAGACTGCTTACACTAATTGAAGGTGTTCTTGCGGCAAACATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTCTATCATAAAGGAACTATCATTGAAATTTACAGAATGAGTCGCAATAAAATGCGTAGACCTTGGAGGGTTAGTGAACTTAAACATGTTGGGGCTGAAAACAAGAAAAGTCCACGTCACAAGAGAGCTTTACTTTTTGTAGACAACTCAGGCGCTGACATTGTTCTAGGGATGCTTCCATTAGCTAGGGAGCTCCTCCGCCGTGGAACTGAAGTAGTGTTGGTTGCAAACTCACTTCCTGCTTTAAATGATGTCACTGCAATGGAGCTTCCTGATATCGTAGCTGAGGCTGCCAAGCTTATTTTCAACCTTGATGTTGGACCACTTGGAAATATTGTTCCTGGAAAATTCACAATGGGTAGTGTCAAGTATGAAGGGTGCGTTAAGATGTCCTACATTATAAAGGAATATGGCCAAAATACTCCTTATGTAAGGCTTGGACAATGCTGTCTTATTGAGTTTACTTTTAAGCATTGTGACATTCTAAGGCGAGCTGCTGAAGTTGGAGGCTTGCTTGTGGATGCAATGATTAATACTTCAAACAGCTCTAAAGAAAATTCATCGTCAATCCCTTTGATGGTTGTTGAGAACGGGTGTGGTAGTCCATGTATAGACTTAAGACAGGTCAGCTCTGAGCTTGCTGCTGCCGCAAAAGATGCCGATCTGTTAATTTTGGAAGGGATGGGTCGAGCTCTTCATACTAACCTCAATGCTCGGTTTAAATGTGATTCTGTGAAGCTTGCAATGGTAAAAAATCAGAGATTGGCTGAAAAATTGGTTAAAGGGAACTTGTACGACTGTATTTGCAAATACGAGCCTGCTAGTTGA 2940 0.4262 MAGSVEGEQQQKQVLGLIEEQKLQTQESENNHNTTGTQLESGEGEREMTPTAASSMHRSGSRPQLDVSKAEIQGNEEEKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEDQSADDKRKRSMKERLGLSNGNRRSYPILGGRLHFVKFETRKINECLDFIHSKQLHWLESHYSDGVTDQNGIIKATGGGAYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGHKEFVQIEPNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRSMDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEEYRPEDISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHHLVERFPIGAPYTGGKIHGPPLGDLNEKASDRDWKFLTYAVISWMEKFLQKGTEITAPVPMTPLAGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKLYEPNTIDLSDNSELKYWLTILSEHLSDLVDKAVASEGGADDAKRRGDAFARAFSAHLARLMEEPSAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLLAELDSMDEESRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMRRPWRVSELKHVGAENKKSPRHKRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKLIFNLDVGPLGNIVPGKFTMGSVKYEGCVKMSYIIKEYGQNTPYVRLGQCCLIEFTFKHCDILRRAAEVGGLLVDAMINTSNSSKENSSSIPLMVVENGCGSPCIDLRQVSSELAAAAKDADLLILEGMGRALHTNLNARFKCDSVKLAMVKNQRLAEKLVKGNLYDCICKYEPAS 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02199 979 SUPERFAMILY Actin-like ATPase domain 203 436 IPR043129 -
Spst9g02199 979 MobiDBLite consensus disorder prediction 1 66 - -
Spst9g02199 979 Gene3D - 86 244 - -
Spst9g02199 979 MobiDBLite consensus disorder prediction 1 44 - -
Spst9g02199 979 SUPERFAMILY Actin-like ATPase domain 93 231 IPR043129 -
Spst9g02199 979 FunFam Pantothenate kinase 2 231 416 - -
Spst9g02199 979 PANTHER PANTOTHENATE KINASE 63 803 IPR004567 GO:0004594|GO:0005524|GO:0015937
Spst9g02199 979 NCBIfam type II pantothenate kinase 94 435 IPR004567 GO:0004594|GO:0005524|GO:0015937
Spst9g02199 979 Gene3D - 313 425 - -
Spst9g02199 979 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 733 977 - -
Spst9g02199 979 FunFam Pantothenate kinase 1 94 230 - -
Spst9g02199 979 PIRSF PanK_long 48 979 IPR015844 GO:0004594|GO:0015937
Spst9g02199 979 SUPERFAMILY AF1104-like 542 977 IPR036075 -
Spst9g02199 979 FunFam Pantothenate kinase 2 86 244 - -
Spst9g02199 979 Gene3D - 563 648 IPR035073 -
Spst9g02199 979 Pfam Fumble 94 434 IPR004567 GO:0004594|GO:0005524|GO:0015937
Spst9g02199 979 MobiDBLite consensus disorder prediction 52 66 - -
Spst9g02199 979 FunFam Pantothenate kinase 2 562 648 - -
Spst9g02199 979 Pfam Damage-control phosphatase ARMT1-like domain 633 964 IPR002791 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02199 Spst-Chr9 49211069 49226299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02199 K24265 - gmx:100800121 1414.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02199 9 49211069 49226299 Spst9g02199 9 49211069 49226299 ECH