Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02153 ATGAATTCTGCCATGAGTTCTCCTATGACATTAGCAACTGTGCCACCCATCAAGATGGGGCTACAATTTGGAGGAAAGTGGTGCAATGCCATGAAGAAAACTAAACGAAGGTTTTCATTGTTGGTGAGTGGAAGTTCTGATTGTAGTGGTGTGGGTGTGATGAATGGAATGAAAGCTGTTGCATTGATTAATGGTACTGCAGAGAAGTTGGGAATTAAAAGCATAGAAGATACAGCGCTTGTTACCTTCCTTCGTGGAAGGTTTGTGGAGGAGAGGTTTGTATATAGGCAAAATTTCACAGTGAGGTCTTACGAAATTGGACCAGATAAAACCATTTCCATGGAGACCCTCGTCAACTTTCTCCAGGAAACTGCCCTGAATCATGTCATTAGCTGTGGCTTAAGTCGGAACGGTTTTGGATCTACTCACGAAATGGATCTTCGCAAACTCATTTGGGTCGTTACTCGTATTCAGGTTCAAGTACAGAGATATAGCAAATGGGGAGATGAAATTGAGGTTGAAACTTGGTTTGATGCTGGCGGAAAGAATGGGACAATAAGAGATTGGACAGTCAGGGATCATTATACCAAAGAAATCATAGCTAAAGCAACCAGCAAATGGGTGTTCATTAATAGAGAAACAAGAAGATTATCCAAGATGCCTGAGGAAGTTAGACAAGAACTTGCTCCTTTCAACTTTAAGAGGTTTGCCATTGCCAGGGAAGAAATAGATCATCAGAGGATACATAAGCTCACGGACGCCACTGCTGAGGGTTTTCGATTTGAAGTGACTCCAGGGTGGAACGACATGGATGTTAACCAGCATGTTAACCACTCAAAATACAGCCGATGGATCTTAGAGAGCGTGCCAAGAGAAATATTAGAAGAATACAAATTGACAAGCATGACTTTAGACTTTCTACGTGAATGTAGGAAATCAGATATACTGGAATCGATGACAAGTCCATCATCCAAAGTGATTGGTGCCTCAAATAATAACATTGTTAGCAGAAAATCGGACCTGCAATATATACACTTGCTTCGTCTTCAGGAAAATAAAACGGAGTTGGTTCGTGCCAGAACCGAGTGGCATCTTAAGCAAAACCACAACTGA 1113 0.416 MNSAMSSPMTLATVPPIKMGLQFGGKWCNAMKKTKRRFSLLVSGSSDCSGVGVMNGMKAVALINGTAEKLGIKSIEDTALVTFLRGRFVEERFVYRQNFTVRSYEIGPDKTISMETLVNFLQETALNHVISCGLSRNGFGSTHEMDLRKLIWVVTRIQVQVQRYSKWGDEIEVETWFDAGGKNGTIRDWTVRDHYTKEIIAKATSKWVFINRETRRLSKMPEEVRQELAPFNFKRFAIAREEIDHQRIHKLTDATAEGFRFEVTPGWNDMDVNQHVNHSKYSRWILESVPREILEEYKLTSMTLDFLRECRKSDILESMTSPSSKVIGASNNNIVSRKSDLQYIHLLRLQENKTELVRARTEWHLKQNHN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02153 370 Gene3D Hotdog Thioesterase 86 369 - -
Spst9g02153 370 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 259 363 IPR029069 -
Spst9g02153 370 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 77 367 IPR045023 GO:0006633|GO:0016297
Spst9g02153 370 Pfam Acyl-ACP thioesterase 94 364 IPR002864 GO:0006633|GO:0016790
Spst9g02153 370 FunFam Acyl-[acyl-carrier-protein] hydrolase 86 369 - -
Spst9g02153 370 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 89 236 IPR029069 -
Spst9g02153 370 CDD 4HBT 95 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02153 Spst-Chr9 46894644 46900846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02153 77 366 Acyl Lipid Metabolism Gene Families AT1G08510 50.000 1.71e-93 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02153 K10781 - gmx:100791811 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02153 9 46894644 46900846 Spst9g02153 9 46894644 46900846 ECH