Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02148 ATGGCCGCAATCAGCAACATCGGTTTGCAATTTCCACGGAGTTTAAACGATTCAAAGGAGAAGAATGTGAGGTTTCATTCTGCATGCAACGTTACTAACATGTTTAATAAACGAAGGGTTTTGTCAGTGACCGCAAGTTATAGTGATAGTCCTCGAAAAATGGACACTGCGCACAGAGTGAATATGAATGGAATACACGTGGCTGAGGCTCCTCTACAAGCAGGAAAGTTGGCAAAAGAAAGTGCAGCAGATGAAGCTATTGTTACCAGCTTGCGTGGAAGGTTTGTGGAGGGTAAGTTTGTGTTTAGGCAAATTTTTGTTATCAGGTCTTATGAAATTGGACCAGATAAAACTGCCACCATGGAGACACTCATGAATTTTCTTCAGGAAACTGCTTTAAATCATGTCACTAGCTCTGGCATCGGGGGAGAAGGTTTTGGAGCAACCCGCGAGATGAGCCTTCGAAAACTCATTTGGGTTGTTACTCGTATTCAAGTTCAAGTACAGAAGTATAGTAAATGGGGAGACGAAATTGAAGTTGATACTTGGGTCGATGCAGCAGGAAAGAATGGAATGCGAAGAGATTGGATAATCAGGGATCACTACACCAAAGAGATCATAACAAGAGCCACAAGCACATGGGTGATCATGAATAGACAAACAAGAAGACTTTCCAAGATCCCTGAAGAGGTTAAACAAGAACTTATTCCTTTCTACCTAAATAGGCTTGCCGTTCCTACAGAAGAAGTAGACTGTGAGAAGATAGACAAACTCACAGATGACACAGCTGAGAGAATCCGATCGGGATTGGCTCCAAGATGGAATGACATGGATGCTAACCAGCATGTCAACAATGTCAAGTACATTGGATGGATTTTAGAGAGTGTGCCAATTGAAGTTCTAGAACACTATAATATGACAAGCATGACTTTGGAGTATCGACGTGAATGTACCCAATCAAATATTGTGGAATCCATGACGTGTCCAACAGCAAGAGTTTTTGAGTCCAATAATAATTCCAAGAACAGAAAACCCGATCTGCAATACACACACTTGCTTCGCCTGCAACATGATAAAGCAGATGTTGTCCGAGCCAGAACTGAGTGGAATTTCAAGCAAAACCAATAG 1128 0.4184 MAAISNIGLQFPRSLNDSKEKNVRFHSACNVTNMFNKRRVLSVTASYSDSPRKMDTAHRVNMNGIHVAEAPLQAGKLAKESAADEAIVTSLRGRFVEGKFVFRQIFVIRSYEIGPDKTATMETLMNFLQETALNHVTSSGIGGEGFGATREMSLRKLIWVVTRIQVQVQKYSKWGDEIEVDTWVDAAGKNGMRRDWIIRDHYTKEIITRATSTWVIMNRQTRRLSKIPEEVKQELIPFYLNRLAVPTEEVDCEKIDKLTDDTAERIRSGLAPRWNDMDANQHVNNVKYIGWILESVPIEVLEHYNMTSMTLEYRRECTQSNIVESMTCPTARVFESNNNSKNRKPDLQYTHLLRLQHDKADVVRARTEWNFKQNQ 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02148 375 FunFam Acyl-[acyl-carrier-protein] hydrolase 93 375 - -
Spst9g02148 375 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 53 373 IPR045023 GO:0006633|GO:0016297
Spst9g02148 375 CDD 4HBT 102 218 - -
Spst9g02148 375 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 99 243 IPR029069 -
Spst9g02148 375 Gene3D Hotdog Thioesterase 93 374 - -
Spst9g02148 375 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 257 369 IPR029069 -
Spst9g02148 375 Pfam Acyl-ACP thioesterase 101 370 IPR002864 GO:0006633|GO:0016790
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02148 Spst-Chr9 46227627 46229632 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02148 93 372 Acyl Lipid Metabolism Gene Families AT1G08510 56.786 4.37e-111 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02148 K10781 - gmx:100814191 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02148 9 46227627 46229632 Spst9g02148 9 46227627 46229632 ECH