Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02139 ATGGTGAAGCCATCGTCATCCCGAAAATCGAGCACGAAGATGGAAGCTTCAAGCTTGAGTATGCTGAACGATGATCTTCTGCAGAACATTCTAGCGAGGCTTCCTGCTCTACCCTTCGCTTCCGCTGCCTGCGTCAGCAAAACATGGAACTCTGTCTGCAATCGCATCCTCTCTCGTCCCAAACTCTCTTCCGCGCTTTCTATCAACCCTTCGCTCCCCGATGCCGTGAACGAAGTTGTGAAAAAGGTTCTGTCGGAGCCAATTCGACCCCATTTTGCTATTGCCAATACTGGAACTGGATTCAGCAATTCCAAGACCCTGCGTCTTATTAGACAGTCAATGGGATCTAATATTCCTGTTATTGTTACCGTAGCAAATGGTATTATTGGAAGGGATGCTGTTACTGATGAGTTTAAAGAGGTCAAATGGGGTGCCCTTTTTAGTGGCTTTGGTGAGGAAGCATATGCAAAGTTTGTAAATGAAGGCATAGTTTTGACTGTTGGCTATTTGCCTGGATTGAAAGTTGAAGCTGTGCCGTTGCGGCGGCCACCAAAGACATCTCAAGCAGCATGCATTGACAATTTTATATTGGGTATTAAGGAATATTCAGCCACTGTCTCTGGTCGCCCATTCCCTATGGGCATCATATTGTTTGGAGAAGCAAGCAGTGACATGAAATTGGTTCTAGAGAAATTGGATTATGCCATGCCTATGGACACAGTCATTGTGGGTGATGAGAGAGGCTCCTTTGACTTTGTACACAACAGTGGGAATGATTCTAGAATCATTTGTAGTAAAAAAGGAAACGTAGAAGCTGTTGCTCTTGTATTTGCTCAGGATAGAGACAGGTCTTTGGGAACTGTTAGGTTTCATGTTGCATTCTCAGATGGTGTTTCAACTGTTGGTCCCAGATACAAGGCAGCCTCAGTTAGACCAAACACCACTGATTGTGCAACATGGTTAACTGCTAGGAGGGAAGGGGAACAGGAACTTCTTGATGGTCAGACTATTCTACTTGATATCAACAATTTGCTGGAGAATCATATTGAATCTCCTGATTTGTACATTGGGGTAATTAAACATAGGAAATTCTCCACTGGAGCAGAGAAGCCAATGCCGAGAACATGTGTTGCATATCATGGAATTGTGGGAGGTGATGAAGAGTATCTATATGTTGATGGCATTGGCATAAAAACAGGAGATTTCTTTCAGTTCTACTATTCAGATCCCGACACTGCCTTGGCGTCATTAACCAAGGTCCATGATGCCCTCAAGAATATTACACTGGAAAGAAATTCTAGGAGTTTCAAGGGTGATGGAGACAATGCTGCCAATGTTTTTGGGGGTCTAGTTTTTGCTTGTTACGGCCGGGGTGAATCCTTCTTTGGACGTTGCAATGTTGATAGCTCCCCTTTCTTGGAAAATTTTCCAGGAGTGCCAGTTTCTGGAATATTTTGTGGTGGAGAAATGGTGCGCCCCTGTACCACTGTGATCGGTCAATGTGAAGGAGCAAGCCCCATTAGTTGCTGTCTGCATGTATACAGCACTGTCTACTTAGCAATGTCGTATACTCCTCCGTCTGTGGAAGATTAG 1593 0.4438 MVKPSSSRKSSTKMEASSLSMLNDDLLQNILARLPALPFASAACVSKTWNSVCNRILSRPKLSSALSINPSLPDAVNEVVKKVLSEPIRPHFAIANTGTGFSNSKTLRLIRQSMGSNIPVIVTVANGIIGRDAVTDEFKEVKWGALFSGFGEEAYAKFVNEGIVLTVGYLPGLKVEAVPLRRPPKTSQAACIDNFILGIKEYSATVSGRPFPMGIILFGEASSDMKLVLEKLDYAMPMDTVIVGDERGSFDFVHNSGNDSRIICSKKGNVEAVALVFAQDRDRSLGTVRFHVAFSDGVSTVGPRYKAASVRPNTTDCATWLTARREGEQELLDGQTILLDINNLLENHIESPDLYIGVIKHRKFSTGAEKPMPRTCVAYHGIVGGDEEYLYVDGIGIKTGDFFQFYYSDPDTALASLTKVHDALKNITLERNSRSFKGDGDNAANVFGGLVFACYGRGESFFGRCNVDSSPFLENFPGVPVSGIFCGGEMVRPCTTVIGQCEGASPISCCLHVYSTVYLAMSYTPPSVED 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02139 530 SMART fbox_2 22 62 IPR001810 GO:0005515
Spst9g02139 530 Pfam FIST N domain 105 310 IPR013702 -
Spst9g02139 530 Pfam FIST C domain 396 491 IPR019494 -
Spst9g02139 530 PANTHER F-BOX ONLY PROTEIN 22 11 525 - -
Spst9g02139 530 Pfam F-box domain 19 57 IPR001810 GO:0005515
Spst9g02139 530 SUPERFAMILY F-box domain 16 54 IPR036047 GO:0005515
Spst9g02139 530 SMART FIST_C_2 337 493 IPR019494 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02139 - - gmx:100815778 933.324