Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02129 ATGCGGTTGGATTACAATGATTTATTTATTTTCAATGGCATAACAAACACACTGAGACTCTGTTCACAGTACCCTCAGCTCACGATGGCGGCCACCGCTTCCAGAACCCCATTTTCTTCTCCATCCTCCTCGTTTCCCAAACGCATTGTCAGATCCACCTTCCCTCTCTCTCATGCAAAGCTCATCAACCCCTCTCATGGTCACCCTCTCGCAATCTCATGCACCCTTCCCAAGCCTCCGCCCGCCACGCCCGCCGCAGTCGTCGTGTCACCTCCGACCGCAGAGACCTTCCTCTCGCGGTTCGCGCCCGGGGAGCCGCGCAAGGGCGCCGACATTCTTGTGGAGGCGCTGGAGCGGCAGGGCGTCACCACGGTCTTCGCGTACCCCGGCGGCGCATCGATGGAGATCCACCAGGCGCTCACGCGCTCCTCGGCCATCCGCAACGTGCTTCCGCGCCACGAGCAGGGCGGCGTGTTCGCCGCCGAGGGCTACGCGCGGTCGTCGGGACTCCCCGGCGTGTGCATCGCGACCTCCGGCCCCGGCGCCACGAATCTGGTGAGCGGCCTCGCGGACGCGATGATGGACAGCGTGCCGGTGGTGGCAATCACCGGGCAGGTCCCGCGGCGGATGATCGGGACCGACGCCTTCCAAGAAACCCCGATTGTGGAAGTTTCTAGATCCATCACCAAACACAACTACCTCATCCTTGACGTGGACGACATTCCTCGGGTGGTGAGCGAGGCTTTCTTCGTGGCCACTTCGGGCCGGCCCGGCCCAGTCCTCATCGACATCCCCAAAGACGTTCAGCAGCAACTGGCGGTTCCTAATTGGGATCCTCTCGTCAAGCTCCCAGGGTATGCCTCCAGGCTGCCGAAGGACCCCAGCGAGGCCCAATTGGACCAGATTGCCAGACTCATATTGGAGTCCCGGAAGCCCGTTTTGTATGTCGGAGGTGGCTCTTTGAACTCCAGCGCTGAGTTAAAGCGCTTTGTGGAACTCACCGGAATACCCGTTGCCAGCACTTTGATGGGCCTTGGAACGTTTCCCATTGGCCATGAACATTCCCTTCAAATGTTGGGCATGCATGGTACTGTTTATGCCAACTACGCCGTTGATAAAAGTGATTTGTTGCTTGCTTTTGGGGTAAGGTTTGACGACCGCGTTACCGGAAAGCTCGAGGCTTTTGCTAGTAGGGCTAAGATTGTTCACATTGACATTGATTCAGCTGAGATTGGGAAGAACAAGCAGCCTCACGTGTCGGTTTGTGGGGATTTGAAGTTGGCATTACAGGGGATTAATAGGATTTTGGAGGCTATGGGCGTGAAGGATAGGCTTGATCTTGGAGCTTGGAGAGAAGAGATTAATGTGCAGAAAGAAAAGTTTCCTTTGAGTTATAAGGCGTTTGAGGATGGGATTTCTCCTCAGCACGCCATTGAGGTTCTTGATGAGTTGACAAATGGGGATGCTATTATTAGCACTGGGGTAGGCCAGCATCAAATGTGGGCTGCACAATTCTACAAGTACAAGAGGCCTAGGCAGTGGTTGACCTCCGGAGGTCTTGGAGCTATGGGTTTTGGATTGCCTGCTGCTATTGGTGCTGCCGTTGCGAACCCTGGTGCAGTTGTGGTTGACATTGATGGGGATGGGAGTTTCATGATGAATGTTCAGGAGTTGGCGACTATAAGAGTGGAGAATCTCCCTGTTAAGATATTGTTGTTGAATAATCAGCACCTGGGTATGGTGGTTCAGTGGGAGGATCGGTTCTACAAGGCCAACAGAGCTCACACCTATCTGGGAGACCCTTCTAGAGAAAGTGAGATATTCCCAAACATGCTAAAGTTCGCAGATGCTTGTGGGATACCCGCAGTGCGTGTGACGAAGAAGGAAGATCTTAGAGCTGCAATTCAGAAAATGTTGCAGACCCCTGGCCCCTATCTTCTCGATGTCATAGTGCCTCATCAGGAACACGTGCTGCCGATGATTCCCAGTAATGGATCCTTCAAGGATGTGATAACTGAGGGTGATGGTAGAACGAGGTACTGA 2043 0.5433 MRLDYNDLFIFNGITNTLRLCSQYPQLTMAATASRTPFSSPSSSFPKRIVRSTFPLSHAKLINPSHGHPLAISCTLPKPPPATPAAVVVSPPTAETFLSRFAPGEPRKGADILVEALERQGVTTVFAYPGGASMEIHQALTRSSAIRNVLPRHEQGGVFAAEGYARSSGLPGVCIATSGPGATNLVSGLADAMMDSVPVVAITGQVPRRMIGTDAFQETPIVEVSRSITKHNYLILDVDDIPRVVSEAFFVATSGRPGPVLIDIPKDVQQQLAVPNWDPLVKLPGYASRLPKDPSEAQLDQIARLILESRKPVLYVGGGSLNSSAELKRFVELTGIPVASTLMGLGTFPIGHEHSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCGDLKLALQGINRILEAMGVKDRLDLGAWREEINVQKEKFPLSYKAFEDGISPQHAIEVLDELTNGDAIISTGVGQHQMWAAQFYKYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPGAVVVDIDGDGSFMMNVQELATIRVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFADACGIPAVRVTKKEDLRAAIQKMLQTPGPYLLDVIVPHQEHVLPMIPSNGSFKDVITEGDGRTRY 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02129 680 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 104 285 IPR029061 -
Spst9g02129 680 Gene3D - 464 650 - -
Spst9g02129 680 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 108 271 IPR012001 GO:0030976
Spst9g02129 680 SUPERFAMILY DHS-like NAD/FAD-binding domain 294 462 IPR029035 -
Spst9g02129 680 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 494 649 IPR011766 GO:0003824|GO:0030976
Spst9g02129 680 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 470 671 IPR029061 -
Spst9g02129 680 CDD TPP_AHAS 472 663 IPR039368 GO:0030976
Spst9g02129 680 FunFam Acetolactate synthase 102 284 - -
Spst9g02129 680 FunFam Acetolactate synthase 292 463 - -
Spst9g02129 680 Pfam Thiamine pyrophosphate enzyme, central domain 300 430 IPR012000 GO:0000287|GO:0030976
Spst9g02129 680 CDD TPP_PYR_POX_like 111 266 - -
Spst9g02129 680 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 106 669 IPR045229 -
Spst9g02129 680 NCBIfam biosynthetic-type acetolactate synthase large subunit 108 672 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Spst9g02129 680 Gene3D - 96 290 - -
Spst9g02129 680 ProSitePatterns Thiamine pyrophosphate enzymes signature. 531 550 IPR000399 GO:0000287|GO:0030976
Spst9g02129 680 FunFam Acetolactate synthase, mitochondrial 463 679 - -
Spst9g02129 680 Gene3D - 299 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02129 Spst-Chr9 45558067 45560405 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02129 K01652 - gmx:100782250 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02129 9 45558067 45560405 Spst9g02129 9 45558067 45560405 ECH