Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02119 ATGAGAACTCCATTTAAGCATGTCAAAAAGAAAAACAATCTCTTTGAATGTCTTCCTGATGATCTAGTAGTCTTCATTCTCTCTAAACTCAGCTCCACCGCTTCCTCGCCTTCGGAATTCATAAACACCGTCCTAACATGCAAGAGATTAAACCAGTTAGGCCTGCATCGTCTGGTGTTATCCAAAGCTGGGCCTAAAGTGTTCGCTGTAAAGCCCAAAAATTGGTCGGAAAAGGCTCACGCTTTCCTTCGACACTGCGTTAGCGCCGGCAACGTTGATGCCTGTTACACTCTCGGAATGATCCGATTCTACTGTCTGGGAAACAGAGGAAGCGGACTTTCGTTGATGGCGAAGGCGGCTATGAAGCTGCACGCGCCGGCTCTGTACTCGCTGGCGGTGGTACAGTTCAATGGCAGCGGCGGGTCCAAGCACGATAAAGATCTACGCGCGGGAGTGGCTTTGTCGGCGCGTGCATCGCTGCTCGGCCACATCGACGCGCTGCGGGAGTTGGGTCATTGTCTCCAGGACGGTTACGGCGTGCGGCAGAACGTTGCTGAGGGGAGGCGGATGCTGGTGCAGGCCAACGTGCGAGAGCTGGCTTATGTGTTACGCGAGGTGACTCCTTCTGCTTCCGATTCTCTGTTGCTGACGTGGCGAACAATGACGTGTCAAAGAGATATCACAGCGTGTCCTCTGTTGAGTGAGTACGGATACAGGGTTCCGGTACCGGAAGTGCAACCGGTGAATTGTTTTATGAGGGAGTGGTTTGAATCCGGTAAAGGGAAATTGGAGAAAGGATTGAGACTGTGCTCGCACATTGGATGTGGTCGACCGGAAACCCGCCCGCACGAGTTTCGCCGGTGCTCGGTTTGCGGGAAAGTTAATTATTGCTCACGTGGATGTCAAGCTATGGATTGGAAGTTAAAGCATAAGATGGAGTGTTCACCCACTGAACCGTATGGTGTAGACCTAGAAAACGAGTTTGTGATACCAAACGATGCCGTTTGA 1008 0.5169 MRTPFKHVKKKNNLFECLPDDLVVFILSKLSSTASSPSEFINTVLTCKRLNQLGLHRLVLSKAGPKVFAVKPKNWSEKAHAFLRHCVSAGNVDACYTLGMIRFYCLGNRGSGLSLMAKAAMKLHAPALYSLAVVQFNGSGGSKHDKDLRAGVALSARASLLGHIDALRELGHCLQDGYGVRQNVAEGRRMLVQANVRELAYVLREVTPSASDSLLLTWRTMTCQRDITACPLLSEYGYRVPVPEVQPVNCFMREWFESGKGKLEKGLRLCSHIGCGRPETRPHEFRRCSVCGKVNYCSRGCQAMDWKLKHKMECSPTEPYGVDLENEFVIPNDAV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02119 335 ProSiteProfiles Zinc finger MYND-type profile. 272 314 IPR002893 -
Spst9g02119 335 Pfam MYND finger 275 314 IPR002893 -
Spst9g02119 335 Gene3D - 263 316 - -
Spst9g02119 335 FunFam Predicted protein 262 318 - -
Spst9g02119 335 SUPERFAMILY HCP-like 76 194 - -
Spst9g02119 335 SUPERFAMILY F-box domain 12 71 IPR036047 GO:0005515
Spst9g02119 335 CDD F-box_SF 16 53 - -
Spst9g02119 335 SUPERFAMILY HIT/MYND zinc finger-like 268 317 - -
Spst9g02119 335 PANTHER MYND DOMAIN-CONTAINING 7 320 IPR044508 -
Spst9g02119 335 Gene3D Tetratricopeptide repeat domain 50 212 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02119 Spst-Chr9 43957025 43958235 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02119 - - gmx:100781713 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02119 9 43957025 43958235 Spst9g02119 9 43957025 43958235 ECH