Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02112 ATGGCACCGAACGATCTCCGCCGTCCGTTCAAGCGACCGCCAATTTCCGATCAAGAGAGGCGCAGGGTACAGACTCTGCTCCGCCAGGCACAGAATCGCCAAGACGCCCAGCGCCACGCGCGTTTCTTAGTCAACACCGTCCTCACTCTCCCCTCTCAATCCTACGCACCAGAATCCGAACCCGAACCCGAACCCGAACCCGAACCCGAAATTGAACTCACCGAAGCTGGTTCCGCTCCCGACTTGAAATCGCTCGAGAACCTCGACGTCCTCGGAGCGTCGAAGCTGAAGGCCGCGGAAGCTCGCAAGTGGTTCGCGAAGCAGCTCATGCTCCCCGAGTGGATGATCGACATCCCCAACAACCTCGCCCAAGATTGGTTCGTCTTCGCTCGCCCTTCCGGAAAACGATGTTTCGTCGTTTCGTGTAACGGAACGACGATTAGCCGTCTGCGTAACGGTTCCATTCTGAATCGGTTTCCCTCCGCGTTACCGAGCGGCGCCAGGAAAAAGGATTCCGGTTCTTCTCAGTCCTACTCTATACTGGATTGCATCTTTCACGAGGTGGATCAGACCTATTACGTTATTGACATGGTTTGTTGGAGGGGTTACTCGCTGTCCGATTGCACTGCGGAGTTTAGGTTCTTCTGGTTGAATTCCAAGCTAGCAGAGACTGGTGCTTGTGAACCTCCTTCTTATTATCACAAGTATAGGTTCAGTTTGGTTCCGGTTTATGGTTGTGACTCGAATGGTCTTCAAGCTGCTTATTCGGCACCGGTGCCTTATGTCAAAGATGGTCTTCTCTTTTATAACAAGCATGCCCACTATCAGGCAGGAGTTACGCCACTAGCGTTAGTATGGAAGGATGAGAACTGTAGTCAATATGTTATGGACACAGACAGTAAAGGACAAGTTCCGAGCCAGCAGCAGGTGGTTTTGGAGCTTCAAGAAGATGGAAAACTGACCACTTCGGATGATCCTCCTGTGGTATTTGGCTGTTTAGATGGAAGCTTCACACAACAGTCAGGGCTCCAATCAGGATGTCTTATTCGGTTTTCAATTGGAGAGGGAGGATTAGTTTTGATGGATGGGAAACTTGAGAAAGCTGATCTACATTATCTTGGCAAGGCCAACCGAGCTCGTGGCTCTGCCGATAGTTTCTCTAAGGTTGTAAGGAAATTTCCAGCACAGCACTAA 1194 0.5092 MAPNDLRRPFKRPPISDQERRRVQTLLRQAQNRQDAQRHARFLVNTVLTLPSQSYAPESEPEPEPEPEPEIELTEAGSAPDLKSLENLDVLGASKLKAAEARKWFAKQLMLPEWMIDIPNNLAQDWFVFARPSGKRCFVVSCNGTTISRLRNGSILNRFPSALPSGARKKDSGSSQSYSILDCIFHEVDQTYYVIDMVCWRGYSLSDCTAEFRFFWLNSKLAETGACEPPSYYHKYRFSLVPVYGCDSNGLQAAYSAPVPYVKDGLLFYNKHAHYQAGVTPLALVWKDENCSQYVMDTDSKGQVPSQQQVVLELQEDGKLTTSDDPPVVFGCLDGSFTQQSGLQSGCLIRFSIGEGGLVLMDGKLEKADLHYLGKANRARGSADSFSKVVRKFPAQH 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02112 397 CDD Snurportin-1_C 104 289 - -
Spst9g02112 397 MobiDBLite consensus disorder prediction 1 21 - -
Spst9g02112 397 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 104 287 - -
Spst9g02112 397 Gene3D DNA ligase/mRNA capping enzyme 3 313 - -
Spst9g02112 397 MobiDBLite consensus disorder prediction 53 73 - -
Spst9g02112 397 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 392 IPR017336 GO:0005634|GO:0005737|GO:0061015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02112 K13151 - gmx:100801927 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02112 9 43398317 43406891 Spst9g02112 9 43398317 43406891 ECH