Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02103 ATGAAGGATTTGGCCTTTGATGAAGGTGCAGGGTCAATAATTTCCATCATGAAGCTCGATACCACTGGTCTCGAATCGTTTCCCTCACTGATTGCACCTCAATGCGACGTAGTTGGAGAACTCTCTGCCGCTCCATCCTTCGACCTTCCGAATTCCAATGATTTCGATGGGTTCTTGAAAGAGGCTATTCAGATGGTGAAGCCGGCGAAGGGTACTACGACTCTTGCTTTTATCTTTAAGGAGGGCGTCATGGTAGCTGCTGATTCTCGAGCTAGCATGGGAGGATACATATCATCGCAGTCTGTAAAGAAGATTATTGAAATCAATCCCTACATGCTTGGGACTATGGCTGGAGGTGCTGCTGATTGTCAGTTTTGGCACAGGAATCTCGGGATCAAGTGCCGTTTGCATGAGTTGGCAAATAAAAGGAGAATTTCAGTAACAGGAGCCTCAAAGCTACTCGCCAATATTTTATACTCTTATCGTGGAATGGGGTTATCGGTTGGTACCATGATTGCTGGATGGGATGAAACGGGACCTGGTCTATATTATGTTGATAGTGAAGGTGGAAGACTTAAAGGCACTAGATTCTCTGTTGGATCCGGGTCGCCATATGCTTATGGTGTATTGGACAGCGGGTACCGATATGACTTGTCAATTGAAGAGGCTGCTGAACTTGCTCGAAGAGCAATTTATCACGCAACATTTCGTGATGGTGCCAGTGGTGGAGTTGCTAGCGTGTACTATGTGGGGCCAAATGGATGGAAGAAATTGTCTGGTGATGATGTTGGTGAACTTCATTACCATTACTACCCAGTTACCCCAAGCACAGTGGAACAAGAAATGGTTGAGGCAACTGGAGCATGA 867 0.4602 MKDLAFDEGAGSIISIMKLDTTGLESFPSLIAPQCDVVGELSAAPSFDLPNSNDFDGFLKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYRYDLSIEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMVEATGA 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02103 288 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 63 270 IPR029055 -
Spst9g02103 288 ProSitePatterns Proteasome beta-type subunits signature. 75 122 IPR016050 GO:0005839|GO:0051603
Spst9g02103 288 CDD proteasome_beta_type_5 72 259 - -
Spst9g02103 288 ProSiteProfiles Proteasome beta-type subunit profile. 71 250 IPR023333 -
Spst9g02103 288 FunFam Proteasome subunit beta 72 281 - -
Spst9g02103 288 Pfam Proteasome subunit 70 250 IPR001353 GO:0005839|GO:0051603
Spst9g02103 288 PRINTS Proteasome component signature 211 222 IPR000243 GO:0004298|GO:0005839|GO:0051603
Spst9g02103 288 PRINTS Proteasome component signature 200 211 IPR000243 GO:0004298|GO:0005839|GO:0051603
Spst9g02103 288 PRINTS Proteasome component signature 236 247 IPR000243 GO:0004298|GO:0005839|GO:0051603
Spst9g02103 288 PRINTS Proteasome component signature 79 94 IPR000243 GO:0004298|GO:0005839|GO:0051603
Spst9g02103 288 PANTHER METALLOPROTEASE TLDD 67 257 IPR023333 -
Spst9g02103 288 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 72 281 IPR029055 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02103 K02737 - gmx:100779240 535.798