Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02093 ATGGCACCAACTGTACCTATAGAGTTTGCTGGACAAAAGGAATCCCGAAAGTACTCTCATTCACAGAATATGGGGAAGTCTAGGAAATACTCCAAAGCCTATGCTACTGGTTTTGTGCCTGATTTTCGGCATGCTGTTGAGACTATGGGTGAATCGGAAGGGTTGGGTAGTTTGGGAAGGGTTGATACGGAGCTGACGGCATCAGCAGATTCTTGTGCACCTAAGAGGAAATGTCCTGGTTTGAACAGCGGTGGTTATGGTAGTTTTGATGTACCTTTTCAACTTTTCTCTCTGTCAAGGATGTCGAGTTTTGAGAGAAAGGATTTGAAAACTAGGTTGACATGGGAACTTGAACAGGTAAAGGAATTTCAGAAGAAAGTTGATAGTATGAACTCAAATGTTGTTGGATTATCACCCTCCAGTGACATTAGGAGCTGCAGTGCAGGGCAAAAGAGGCCTAAGCTGGATAGCCAGCATATGACTATGGATGTATCGGTGCCACATGGTAAGAAAAGGCCCTTACCGGGAAATAGTGGTCCCAAGACAAAGAAAAGTATATCTGGGCGCTCTGAATTTGTAAAACCTGCTGCACCAGTGACTTCACATGCTGCCTTCATGAAACCTTGTGAGGCATTACTTAACCGATTGATGACTCATCAGTTTGGTTGGGTTTTTAACACACCAGTTGATGTTGTTAAATTGAACATTCCTGATTATTTCAATGTCATCAAACATCCAATGGACTTGGGTACTGTGAAGAGGAGAATAACCTCTGGTGAATACTCAAATCTCATGGATTTTGCTGCTGATGTGAGGCTGACTTTCTCAAATGCAATGACTTATAATCCACCTGGCAATGATGTACACCTCATGGCAGATACCCTTACTAAAATTTTTGAATCGAGATGGAAGGCCATAGAAAAGAAAATTCCTGTTATTGATTGTGTCCCGTCTGAGCCTTCAAGACCTACTCGTGTGGAAACAGAAATTTCTGACCGAGTTCTTCCCACTAAAAAGAAGAAAATAATGCCAAATAATGTCAAGCCTGAGCCTCTTAAAAAAGTAATGACTGTAGAGGAGAAGCATAAATTGAGTGTGGAGTTGGAGGCCATGCTTGGAGAGCTGCCTGATGCTATTGTTGATTTCTTGAGGGAGCAAAGTTATAATGCAGGGCAAACCAATGATGATGAAATTGAGATTGATATAGATGCTCTTAGTGATGATACCCTATTCAAACTGCGGAAGCTTCTTGATGATTATTTGCTGGAGAAGCAAAGATCCCAGGCAAAAGCTGGACAATGTGAAATGGAGCTTCTGAATGAATCAGGGTTCAGTAATTCACCAGTGCAACCTTGCAAAGGCAATGAACAGGTCGAGGAGGATGTGGACATTGTTGGTGGAAATGATCCTCCTATTTCAATTTATCCTCCATTAGAGATTGAAAAAGATGGTACTAATCGAAACAGTAAATGCAGTAGTTCAAGCAGCTCTAGTAGTGAATCTGGCTCTTCATCCAGTGATTCAGACTCAGGTAGTTCATCTGGTAGTGAGTTGGATATGGCTAAGACATCAGAACATCTTAGTGCTACCAAGGAAAATGTAGGATCTGGCTTGACCTTAGATCAAAATAAAGGGGATCGTGGTAATTCAGAAACTGAAAAGGATTCAACAAATGTGGGAGGCCAAGTTGAGCAGTCTTCCCAGAGTAAGCTTGTTACTTCAGAACCAGAAAGTCATCAAGAGGGGGAGAGTGCTGCATCTAAGAGGCAAGTCTCTCCCGAAAAGCTCTACCGTGCAGCTTTATTAAGGAGCCGATTTGCTGACACCATTCTTAAAGCTCAGGAGAAAGCCCTTGAAAAGGATGACAAGCGGGATCCTGAAAAACTTAGGATAGAGCGAGAAGATCTTGAAAGGAGGCAGAAAGAAGAGAAAGCCCGGTTGCAGGCAGAGGCAAAGGCTGCAGAAGAAGCTCGGAGGAAAGCTGAAGCAGTAGCTGCAGCTGAAGCCAAGAGGAAAAGGGAACTGGAAAGAGAAGCAGCTCGTCAAGCATTGCAAAAGATGGAGAAAACTGTTGATATCAACGAGAGCAGTCAATTTTTGGAAGATCTTGAGATGCTTAGTGCTGTACATGATGAACCTCTGCCAAGTTTCAAAGAGGAGATAAGCGCAGATCTACCTCAAAATGGATTGGGTAGGATCAAGCTGCAGGGAAATCCCTTAGAACAGCTAGGATTGTATATAAAGGATGAAGATGAGGATGAGGAGGAACTACCTTCTTGTGGTGCTGCAGGACCCTCAAATGATGTGGAAGAAGGAGAGATTGACTGA 2328 0.43 MAPTVPIEFAGQKESRKYSHSQNMGKSRKYSKAYATGFVPDFRHAVETMGESEGLGSLGRVDTELTASADSCAPKRKCPGLNSGGYGSFDVPFQLFSLSRMSSFERKDLKTRLTWELEQVKEFQKKVDSMNSNVVGLSPSSDIRSCSAGQKRPKLDSQHMTMDVSVPHGKKRPLPGNSGPKTKKSISGRSEFVKPAAPVTSHAAFMKPCEALLNRLMTHQFGWVFNTPVDVVKLNIPDYFNVIKHPMDLGTVKRRITSGEYSNLMDFAADVRLTFSNAMTYNPPGNDVHLMADTLTKIFESRWKAIEKKIPVIDCVPSEPSRPTRVETEISDRVLPTKKKKIMPNNVKPEPLKKVMTVEEKHKLSVELEAMLGELPDAIVDFLREQSYNAGQTNDDEIEIDIDALSDDTLFKLRKLLDDYLLEKQRSQAKAGQCEMELLNESGFSNSPVQPCKGNEQVEEDVDIVGGNDPPISIYPPLEIEKDGTNRNSKCSSSSSSSSESGSSSSDSDSGSSSGSELDMAKTSEHLSATKENVGSGLTLDQNKGDRGNSETEKDSTNVGGQVEQSSQSKLVTSEPESHQEGESAASKRQVSPEKLYRAALLRSRFADTILKAQEKALEKDDKRDPEKLRIEREDLERRQKEEKARLQAEAKAAEEARRKAEAVAAAEAKRKRELEREAARQALQKMEKTVDINESSQFLEDLEMLSAVHDEPLPSFKEEISADLPQNGLGRIKLQGNPLEQLGLYIKDEDEDEEELPSCGAAGPSNDVEEGEID 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02093 775 CDD Bromo_plant1 206 303 IPR037377 -
Spst9g02093 775 Gene3D - 194 313 IPR036427 GO:0005515
Spst9g02093 775 Gene3D - 350 428 IPR038336 -
Spst9g02093 775 PANTHER TRANSCRIPTION FACTOR GTE8 185 756 - -
Spst9g02093 775 Pfam Bromodomain 209 292 IPR001487 GO:0005515
Spst9g02093 775 SMART bromo_6 198 308 IPR001487 GO:0005515
Spst9g02093 775 MobiDBLite consensus disorder prediction 487 545 - -
Spst9g02093 775 MobiDBLite consensus disorder prediction 616 643 - -
Spst9g02093 775 MobiDBLite consensus disorder prediction 141 189 - -
Spst9g02093 775 Coils Coil 633 690 - -
Spst9g02093 775 MobiDBLite consensus disorder prediction 462 593 - -
Spst9g02093 775 PRINTS Bromodomain signature 220 233 IPR001487 GO:0005515
Spst9g02093 775 PRINTS Bromodomain signature 270 289 IPR001487 GO:0005515
Spst9g02093 775 PRINTS Bromodomain signature 236 252 IPR001487 GO:0005515
Spst9g02093 775 PRINTS Bromodomain signature 252 270 IPR001487 GO:0005515
Spst9g02093 775 MobiDBLite consensus disorder prediction 554 580 - -
Spst9g02093 775 MobiDBLite consensus disorder prediction 747 775 - -
Spst9g02093 775 ProSiteProfiles Bromodomain profile. 217 289 IPR001487 GO:0005515
Spst9g02093 775 ProSiteProfiles NET domain profile. 346 428 IPR027353 -
Spst9g02093 775 Pfam Bromodomain extra-terminal - transcription regulation 356 418 IPR027353 -
Spst9g02093 775 SUPERFAMILY Bromodomain 181 312 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02093 Spst-Chr9 42849961 42853766 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02093 - - gmx:100776368 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02093 9 42849961 42853766 Spst9g02093 9 42849961 42853766 ECH