LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst9g02092	ATGCAAGTCCTGCAAACTTCTTATCTCTTCACTTTTCCTAAACCCCTAAACCCTTCCCCTCCTCAATTCCACCACCGTCCTCCGCCCTTTCTCCACCATCCTCCGCCTTTCCTCCAGCGCCTCCGCCCTCTCCCCGGCCCCTTCCTCGTCCCCAAATCCTTCCGCACGGAAGAGTTCCCGGTGGACGATAGCTTCCCCGAGAACTTCGGCCCCAACGACAAGGAATCCGAGGATGAAGCCCGGCGTCGCAACTGGATCGATCGCGGGTGGGCTCCGTGGGAGGAAATCCTCTCTCCGGAAGCGGATTTCGCGCGCAAGAGCCTCAACGAAGGCGAGGAAGTTCCCCTAAAAACCCCCGAAGCCATCGAAGCGTTCAAAATGCTGAGCCCTAGCTACCGCAAGAAGAAGAGGGAGGAGATGGGGCTGACGGAGGAGGAGTACTTCGCGAAGCAGTTCGAGATCAAGGGCGAGATTCCGGAGCCGCTCGTGACCACGTGGTCGGGGCCGCTCGTGGTGCGTCTCGTGCCGCCGCGCGACTGGCCACCGCGGGGGTGGAGCGTGGACCGGAAGGAGCTGGCGTTTATTCGAGAGGCGCATAAGATGCAGGCGAAGGTGACCTTGGAGGAGGTGGAGAGTGGAGTGAGGACTGACACGGATGACGTGTGCTTGGATAGGTATAAGGTGTTTCTGAAGCAGTATAAGGAGTGGGTGGAGGCTAACAAGGATAGATTGGAAGAGGAGTCTTATAAGGTTGCAATTTCACTTCAAACCATTGCTGAACTTTTTGCTCAAGACCAAGATTATTACCCTGGTAGAAGGAAAAGAGGGAAGGACTACAAGGAGGGCATGTATGAGCTTCCGTTCTATTATCCTGGCCAAATTTGTGTTGGGAAGGTTACGATGTTGCATCTCTATCAAGGGGCATTTGTTGACATTGGCGGGGTACATGATGGGTGGGTTCCTATAAGGAGAAATGATTGGTTTTGGCTTCGCCATCACATAAAAGTGGGTATGCACGTCATTGTTGAAATTATGGCAAAGCGAGATCCTTATCGCTTCCGCTTTCCTATTGAACTTCGTTTTGTTGATCCAAATGTGGATCATCTAATGTATGCTTACATGTTTTTGGCATTCAATGTTCTTTTTCACAAATTTGACTTCCCACCAATATTTCATCGTGATGAAGATACCAATGAAGATGAATTACGGCGTGATTGTGGAAGACCTCCTGTTCCTAGAAAAGATTTGAAAGACAAGCCAGAGGAAGAACCTCTATTGTCTAATCATCCATACGTTGATAAGTTATGGCAAATTAATGTCGCTGAGCAACTGATGGTGGATGATATGGCAATTAATCCTGATAAATATAAAGGCAAAAAGCCTTCAGATTTGGTTGATGAAGAAGATTTTGATGAACAAAATGATGTTGAGTATACCAAAGTTAAATATAATAATACATTAATACCAAAAACTATTCTGAAAACAAGTGTCCATGAACTTGATTTAGAGGCTGCACTTGCTGAGCGTGAGCACCTTGTTAAATTAGGGAAAGAAGCAGCGGAGAGAGGTGAAAAATACAAAATTAAAAAGCTGAGGCGCAATATTGAGATGGATGAGTATGACTACATGCATTGGCGTAGATCATTTGAGGAAAGAGAAGCATTGATAAGAGACATAAGCTGTCGCAAAGCACTTGGTCTGCCATTGGAAGAGCCAGGAAGGTATATGGATGCTAGTTTTTTTGACAAAGACAAATATGATCCTACAAGTCCACTGTACCGTTATGACTACTGGGGGGAACCTAAGAATTCAGAGAAGAGCATTCAAGAGCGAATGACAGATATTCATAACAAAAAAATTGTGGGCAAGGCTGATGTTTGGTATGGAATGTCGTACGATGATTGCGTCAAGGAACAAATGGAAAGTGAAGCCCAGTCAAAAGAACAGGAAGGCAAAGATGAGGATGATCAAAGTGATGAAGATGAGAGTGAGGACGAGGACTATTTTGACTTCAGTGTTTTGAACAGTCTCGATAGTAACTTGTCAGATCAACCTCATGTTAATGGCACCGAGTCTTCTACAGTATCAGGTGAAGGCATGTTTGAGGATTGA	2112	0.464	MQVLQTSYLFTFPKPLNPSPPQFHHRPPPFLHHPPPFLQRLRPLPGPFLVPKSFRTEEFPVDDSFPENFGPNDKESEDEARRRNWIDRGWAPWEEILSPEADFARKSLNEGEEVPLKTPEAIEAFKMLSPSYRKKKREEMGLTEEEYFAKQFEIKGEIPEPLVTTWSGPLVVRLVPPRDWPPRGWSVDRKELAFIREAHKMQAKVTLEEVESGVRTDTDDVCLDRYKVFLKQYKEWVEANKDRLEEESYKVAISLQTIAELFAQDQDYYPGRRKRGKDYKEGMYELPFYYPGQICVGKVTMLHLYQGAFVDIGGVHDGWVPIRRNDWFWLRHHIKVGMHVIVEIMAKRDPYRFRFPIELRFVDPNVDHLMYAYMFLAFNVLFHKFDFPPIFHRDEDTNEDELRRDCGRPPVPRKDLKDKPEEEPLLSNHPYVDKLWQINVAEQLMVDDMAINPDKYKGKKPSDLVDEEDFDEQNDVEYTKVKYNNTLIPKTILKTSVHELDLEAALAEREHLVKLGKEAAERGEKYKIKKLRRNIEMDEYDYMHWRRSFEEREALIRDISCRKALGLPLEEPGRYMDASFFDKDKYDPTSPLYRYDYWGEPKNSEKSIQERMTDIHNKKIVGKADVWYGMSYDDCVKEQMESEAQSKEQEGKDEDDQSDEDESEDEDYFDFSVLNSLDSNLSDQPHVNGTESSTVSGEGMFED	703

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst9g02092	703	MobiDBLite	consensus disorder prediction	653	671	-	-
	Spst9g02092	703	MobiDBLite	consensus disorder prediction	398	425	-	-
	Spst9g02092	703	MobiDBLite	consensus disorder prediction	61	81	-	-
	Spst9g02092	703	Coils	Coil	637	657	-	-
	Spst9g02092	703	PANTHER	PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10	49	688	IPR044967	GO:0000427\|GO:0003723
	Spst9g02092	703	MobiDBLite	consensus disorder prediction	639	703	-	-
	Spst9g02092	703	ProSiteProfiles	S1 domain profile.	292	360	IPR003029	GO:0003676
	Spst9g02092	703	MobiDBLite	consensus disorder prediction	673	697	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst9g02092	-		-	gmx:100783002	1125.15

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst9g02092	9	42841592	42849208	Spst9g02092	9	42841592	42849208	ECH