Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02089 ATGGGCAAGGTCAAGATCGGAATCAACGGATTTGGAAGAATCGGCCGTTTGGTGGCCAGAGTGTCTCTTCAGAGAGACGATGTGGAACTCGTTGCCATTAACGACCCTTTCATCACCACCGATTACATGACATACATGTTTAAATACGACACTGTTCACGGACACTGGAAACATAGCGATGTCACCGTTAAGGACTCCAATACCCTTCTCTTTGGTCAGAAGCCAGTCACTGTTTTTGGACACAGGAACCCCGAGGAGATCCCATGGGCTGAAACTGGAGCTGAAATCATTGTTGAGTCCACCGGAGTTTTCACTGATAAAGACAAGGCTGCTGCTCATTTGAAGGGTGGTGCTAAGAAGGTTATTATTTCTGCCCCCAGCAAGGATGCTCCCATGTTTGTTGTTGGTGTTAATGAGCACGAGTACAAGCCTGAATATGATATTATTTCCAATGCTAGCTGCACAACCAACTGTCTTGCTCCACTTGCTAAGGTTATTAATGACAGGTTTGGCATCGTTGAGGGTTTGATGACCACTGTCCATTCCATCACTGCTACCCAGAAGACCGTTGATGGACCATCAGCCAAAGACTGGAGAGGTGGAAGAGGTGCTTCAGTTAACATCATTCCTAGCAGTACTGGTGCTGCTAAGGCTGTTGGGAAAGTCCTCCCATCTTTGAATGGAAAATTGACTGGTATGGCATTCCGTGTTCCTACCGTGGATGTCTCAGTTGTTGACCTCACGGTGAGGCTGGAGAAGAGTGCCACCTATGACGATATTAAAGATGCTATCAAGGAGGAATCAGAGGGCAAGTTGAAGGGAATTCTTGGTTACACTGAAGATGATGTGGTCTCCTCAGACTTTATCGGTGACAGCAGATCAAGTATTTTTGATGCAAAGGCTGGAATTGCATTGAACAAGAATTTTGTGAAGATCGTCACGTGGTACGACAATGAGTGGGGATACAGCTCACGTGTGATTGACCTGCTTGTTCACGTTGCCAAGACGTGTGCAAAGTAA 1020 0.4637 MGKVKIGINGFGRIGRLVARVSLQRDDVELVAINDPFITTDYMTYMFKYDTVHGHWKHSDVTVKDSNTLLFGQKPVTVFGHRNPEEIPWAETGAEIIVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPEYDIISNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSAKDWRGGRGASVNIIPSSTGAAKAVGKVLPSLNGKLTGMAFRVPTVDVSVVDLTVRLEKSATYDDIKDAIKEESEGKLKGILGYTEDDVVSSDFIGDSRSSIFDAKAGIALNKNFVKIVTWYDNEWGYSSRVIDLLVHVAKTCAK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02089 339 Gene3D Dihydrodipicolinate Reductase; domain 2 153 318 - -
Spst9g02089 339 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 IPR020831 GO:0016620
Spst9g02089 339 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 IPR020831 GO:0016620
Spst9g02089 339 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 113 126 IPR020831 GO:0016620
Spst9g02089 339 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 IPR020831 GO:0016620
Spst9g02089 339 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 IPR020831 GO:0016620
Spst9g02089 339 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 153 316 - -
Spst9g02089 339 PIRSF GAPDH 2 338 IPR020831 GO:0016620
Spst9g02089 339 FunFam Glyceraldehyde-3-phosphate dehydrogenase 4 164 - -
Spst9g02089 339 FunFam Glyceraldehyde-3-phosphate dehydrogenase 153 318 - -
Spst9g02089 339 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 3 335 IPR020831 GO:0016620
Spst9g02089 339 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 107 IPR020828 GO:0051287
Spst9g02089 339 SMART gp_dh_n_7 4 154 IPR020828 GO:0051287
Spst9g02089 339 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 316 IPR020829 GO:0016620
Spst9g02089 339 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 152 159 IPR020830 GO:0016620
Spst9g02089 339 NCBIfam glyceraldehyde-3-phosphate dehydrogenase, type I 5 328 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Spst9g02089 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 170 IPR036291 -
Spst9g02089 339 Gene3D - 4 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02089 Spst-Chr9 42770059 42772522 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02089 K00134 - gmx:100781161 622.854