Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02080 ATGCTGAAATCAACCTTCACTCCCATTTTCTGGGTGTTAACCCCCAAACCCAACCCTCAAAATATTCCCTCCAAGGCATTGACCAGAAACTTCTTCACAAACAGCACGCCACTCGTTCGACATAATGCCTCTCTCAACCCCGCCACCCCCTCAACCCCTGCCTCCGCCTACATCCACCTCCCTTTCTGCCGGAAACGCTGCCACTACTGCGACTTCCCCATCGTAGCTCTCGGCTCCGCCTCCACTCAAACTCACCTCGACCCTCGCGTCTCTAACTACATTAACTGGCTCTGCCGGGAAATCACCGCCACCAAAGTGAACCAACCCGCTTCCAGCACGCCCCTTCAGACTGTCTACTTTGGCGGTGGGACACCGTCGCTGGTGCCTCCTGCGTTGGTTTCATCCGTTTTGGAGACTCTGAGGGTAAAGTTTGGGCTTTGTGAGGACGCGGAAATATCGATGGAGATGGACCCCGGCACGTTTGATGCTGAGAAGATGCGGGAGATGGTGGCGTTGGGAGTGAATAGAGTGTCTTTGGGAGTTCAAGCGTTTCAGGAGGAGCTGCTGAGATCGTGTGGGAGGGCACATGGGGTGCTAGAAGTTCATGAGGCTATTGGCGTTGTCAAGTCATGTGGGGTTGAGAATTGGAGTGTTGATCTCATAGCTTCGTTGCCTCGTCAGAGTAGTGAAATGTGGGAGGAAAGTTTAAGGCTCACCATTGAGTCACAACCTACTCACGTGTCCGTTTATGACTTGCAAATTGAGCAAGGAACGAAATTTGGACGATTGTACTCACCAGGGGAATTTCCGATGCCTTCTGAAACACAATCTGCTGAGTTCTATAAGATGGCTTCAAGAATGCTTTCTGATGCGAATTACAACCATTATGAAATCAGCAGCTACTGCAAGAGTGGGTATGAGTGCAAACACAACTTTATCTACTGGAAGAACAAGCCTTTCTATGCCTTTGGCCTTGGCTCTGCTAGTTTTGTTGGTGGGTTAAGGTTTTCAAGACCAAGGAAGGTCAATGATTACATTAATTTTGTGCAGAATCTAGAAAATGGACTAGTAGATAGCTCTGGTGATGGTCACATTCAGGGCAAGGACACGGCCATGGATGTGGTGATGCTGTCCCTAAGAACTGCACAAGGCCTAGATTTGAGGAGTTTCCAAGAATCATTTGGCGGCTCTGCCGTTTTGTCTTTGCTAGAGGCTTATAAACCTTATGTTGAGAGTGGACTTGTGGTTTACTTGGACGAGCAGAGGAGAACCATCAGAATAGATGACCTGAACTATTCTTTTCTGAATAAACCAAATACAGAAAAGAGGGTGGCTTACATAAGGCTAAGTGATCCAGAAGGTTTCCTCTTATCAAATGAGTTAATAGCCCTTGCTTTTGGGGTTATTGACTCTTGGAAGGATTGTTTTCCATACCAAGAAGCAGAAGCTACTTGA 1455 0.479 MLKSTFTPIFWVLTPKPNPQNIPSKALTRNFFTNSTPLVRHNASLNPATPSTPASAYIHLPFCRKRCHYCDFPIVALGSASTQTHLDPRVSNYINWLCREITATKVNQPASSTPLQTVYFGGGTPSLVPPALVSSVLETLRVKFGLCEDAEISMEMDPGTFDAEKMREMVALGVNRVSLGVQAFQEELLRSCGRAHGVLEVHEAIGVVKSCGVENWSVDLIASLPRQSSEMWEESLRLTIESQPTHVSVYDLQIEQGTKFGRLYSPGEFPMPSETQSAEFYKMASRMLSDANYNHYEISSYCKSGYECKHNFIYWKNKPFYAFGLGSASFVGGLRFSRPRKVNDYINFVQNLENGLVDSSGDGHIQGKDTAMDVVMLSLRTAQGLDLRSFQESFGGSAVLSLLEAYKPYVESGLVVYLDEQRRTIRIDDLNYSFLNKPNTEKRVAYIRLSDPEGFLLSNELIALAFGVIDSWKDCFPYQEAEAT 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02080 484 Pfam Radical SAM superfamily 58 238 IPR007197 GO:0003824|GO:0051536
Spst9g02080 484 SUPERFAMILY Radical SAM enzymes 43 421 - -
Spst9g02080 484 SMART MiaB 53 283 IPR006638 GO:0003824|GO:0051536
Spst9g02080 484 NCBIfam radical SAM family heme chaperone HemW 55 414 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Spst9g02080 484 PANTHER COPROPORPHYRINIGEN III OXIDASE 42 471 IPR034505 -
Spst9g02080 484 SFLD HemN-like, clustered with heat shock genes 52 421 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Spst9g02080 484 ProSiteProfiles Radical SAM core domain profile. 48 291 IPR007197 GO:0003824|GO:0051536
Spst9g02080 484 SFLD Radical SAM 52 421 IPR007197 GO:0003824|GO:0051536
Spst9g02080 484 Gene3D tm_1862 like domain 61 291 IPR023404 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02080 - - gmx:100779022 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02080 9 42469415 42471391 Spst9g02080 9 42469415 42471391 ECH