Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02071 ATGGCGGAGAAGTTTGGAGTAGCAGCTGCAGCAGTAGCAGAAGAGAGCTCTAACTCGAGGGTTCTTCACAATACCACCGCGAAGCTCGTTGTTTTGGCCGACCTCAACGTCGATCCTCCCGAAGCCGACGACGACTACTCTTCCCATGCCCCTCCTCCACGGATTGCCAATTTGGCAAATGATGAAAGCAGTCAAGATAAGAGTTTGTTGTCCAAAGACACTGATAGCATGGAAGGTGAAAGTAAAAAGTCGAACAGACTGGGCAAATGCCGCTCCAGACTTAGCAAGACAGATTCCTCTCTTGATTGTGGAGCTGATGCAGATGCTGATCAACATGTTCAAGGACCTCCTTCATCTCGGGAGGAAAAAGTTAGCAGTGTGAAGACTGGCTTGGTTCATGTTGCAAGGAAGATGCCCAAAAATGCTCACGCTCATTTTATACTTGGCTTGATGTATCAAAGATTAAGCCAGCCTCAAAAGGCGATGTTGGCTTATGAGAAGGCAGAAGAGATCTTGCTCAGGCCTGACGTTGAGATTGATAGGCCAGAGTTGCTTTTGTTAGTTCAGATTCACCATGCGCAGTGCCTGTTACTAGAAAGTTCATCAGAAAATAGTTCTGATAAAGAACTTGAACCTCATGAACTTGAAGAGATTCTTTCTAAGCTGAAAGAGTCAGTGCAGTCAGATGTCAGACAGACAGCTGTATGGAACACACTGGGTTTTATCCTTCTGAAAACTGGTCGTGTGCAGAGTGCTATCTCAGTTCTGTCATCATTGTTGTTCATTGCACCAGAGAACTATGATTGCCTAGGAAATCTTGGGATAGCTTATCTTCAAATTGGGAATTTGGAATTATCTGCAAAATGTTTCCAACAATTGATTTTAAAAGATCAAAATCATCCTGCGGCTTTGGTCAATTATGCTGCCCTTCTTTTGAGTAAATATGCTTCAGTTGTAGCAGGTCCTGGTGCAAGTGCTGCTGAAGGTGCCATGGCTGATCGGATCATGGCTGCAAATGTTGCCAAGGAATGTTTGTTGGCTGCAATTAAAGCAGATAGCAAATCAGCCCATGTATGGGCAAATCTTGCCTATGCATTTTCTATTATTGGTGATCATCGAAGTTCCAGCAAGTGCTTGGAGAAGGCTGCCAAACTGGAACCCAATTGCATGTCTACTAGATATGCTGTTGCTATCCATCGAATAAAGGAGGCTGAAAGATCTCAAGATCGTAGTGAACTGCTTTCATGTGCTGGAAATGAAATGGCTTCTATAATAAGAGATGGTGATTCATCCCTGGTTGAGATTCCAATAGCATGGGCTGGACTTGCCATGGTTCACAAGGCTCAACATGAGATAGTGGCAGCATATGAAAGTGAACAGCACCGGTTGAGAGAAGTGGAAGAGCGTGCTGTTTGCAGTTTAAAGCAGGCTATAGCAGAAGATCCAAATGATGCTGTGCAGTGGCACCAACTCGGTGTTCATAGTCTTTTTGCCCGGCAATTCAAAACATCACAAAAGTACCTCAAAGCTGCTGTTGCCTGTGACAAGGATTGCAGCTATGCATGGTCTAACCTAGGTGTCTCACTTCAACTATCAGAGGAACCATCACAAGCTGAAGAAGTATACAAGAAAGCATTGTCTTTGGCAACAACTCAACAAGCGCATGCTATATTATCCAACTTGGGTATTCTCTACCGCCATCAGAAACAATATCAACGTGCGAAGGCTATGTTTACAAAGGCACTTGAGCTACAGCCTGGATATGCGCCTGCATTCAACAATCTGGGTCTTGTGTTTGTTGCTGAGGGTCTTTTGGAAGAGGCCAAGTATTGTTTCGACAAAGCTCTCCAATCAGATCCATTGCTGGATGCAGCTAAGTCGAATATGATAAAGGTGGTTTTCATGTCCAAGTTATGCAAAGGCCTCTCCTCTTGCGCTCTTAAAGAATGA 1950 0.4431 MAEKFGVAAAAVAEESSNSRVLHNTTAKLVVLADLNVDPPEADDDYSSHAPPPRIANLANDESSQDKSLLSKDTDSMEGESKKSNRLGKCRSRLSKTDSSLDCGADADADQHVQGPPSSREEKVSSVKTGLVHVARKMPKNAHAHFILGLMYQRLSQPQKAMLAYEKAEEILLRPDVEIDRPELLLLVQIHHAQCLLLESSSENSSDKELEPHELEEILSKLKESVQSDVRQTAVWNTLGFILLKTGRVQSAISVLSSLLFIAPENYDCLGNLGIAYLQIGNLELSAKCFQQLILKDQNHPAALVNYAALLLSKYASVVAGPGASAAEGAMADRIMAANVAKECLLAAIKADSKSAHVWANLAYAFSIIGDHRSSSKCLEKAAKLEPNCMSTRYAVAIHRIKEAERSQDRSELLSCAGNEMASIIRDGDSSLVEIPIAWAGLAMVHKAQHEIVAAYESEQHRLREVEERAVCSLKQAIAEDPNDAVQWHQLGVHSLFARQFKTSQKYLKAAVACDKDCSYAWSNLGVSLQLSEEPSQAEEVYKKALSLATTQQAHAILSNLGILYRHQKQYQRAKAMFTKALELQPGYAPAFNNLGLVFVAEGLLEEAKYCFDKALQSDPLLDAAKSNMIKVVFMSKLCKGLSSCALKE 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02071 649 Gene3D Tetratricopeptide repeat domain 82 316 IPR011990 GO:0005515
Spst9g02071 649 ProSiteProfiles TPR repeat region circular profile. 555 586 - -
Spst9g02071 649 MobiDBLite consensus disorder prediction 38 126 - -
Spst9g02071 649 SUPERFAMILY TPR-like 234 620 IPR011990 GO:0005515
Spst9g02071 649 Gene3D Tetratricopeptide repeat domain 556 633 IPR011990 GO:0005515
Spst9g02071 649 Pfam Tetratricopeptide repeat 589 620 IPR019734 GO:0005515
Spst9g02071 649 Pfam Tetratricopeptide repeat 142 171 IPR019734 GO:0005515
Spst9g02071 649 Pfam Tetratricopeptide repeat 356 389 IPR019734 GO:0005515
Spst9g02071 649 SMART tpr_5 267 300 IPR019734 GO:0005515
Spst9g02071 649 SMART tpr_5 555 588 IPR019734 GO:0005515
Spst9g02071 649 SMART tpr_5 485 518 IPR019734 GO:0005515
Spst9g02071 649 SMART tpr_5 356 389 IPR019734 GO:0005515
Spst9g02071 649 SMART tpr_5 233 266 IPR019734 GO:0005515
Spst9g02071 649 SMART tpr_5 589 622 IPR019734 GO:0005515
Spst9g02071 649 SMART tpr_5 142 175 IPR019734 GO:0005515
Spst9g02071 649 SMART tpr_5 519 552 IPR019734 GO:0005515
Spst9g02071 649 ProSiteProfiles TPR repeat profile. 519 552 IPR019734 GO:0005515
Spst9g02071 649 ProSiteProfiles TPR repeat profile. 589 622 IPR019734 GO:0005515
Spst9g02071 649 Pfam Tetratricopeptide repeat 269 301 IPR019734 GO:0005515
Spst9g02071 649 SUPERFAMILY TPR-like 339 548 IPR011990 GO:0005515
Spst9g02071 649 Gene3D Tetratricopeptide repeat domain 337 422 IPR011990 GO:0005515
Spst9g02071 649 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 29 645 - -
Spst9g02071 649 ProSiteProfiles TPR repeat profile. 233 266 IPR019734 GO:0005515
Spst9g02071 649 MobiDBLite consensus disorder prediction 66 96 - -
Spst9g02071 649 ProSiteProfiles TPR repeat profile. 555 588 IPR019734 GO:0005515
Spst9g02071 649 ProSiteProfiles TPR repeat profile. 356 389 IPR019734 GO:0005515
Spst9g02071 649 Gene3D Tetratricopeptide repeat domain 467 555 IPR011990 GO:0005515
Spst9g02071 649 Pfam Tetratricopeptide repeat 521 585 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02071 470 621 Glycosyltransferase AT3G04240 25.490 3.09e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02071 - - gmx:100820184 1085.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02071 9 42127262 42132703 Spst9g02071 9 42127262 42132703 ECH