Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02045 ATGACTGTCAGGGTGAAAGACGGGCGCTGTACGGTGAGGGGCAAGGTCGTTTTGTCCCATGTCCCCGGAAACATCGTTGTTTCTCCGGTTGGAACAGAGTCCGCTTTCTTGGGTGCAACTTCAACCGTTTCAAGTTCTCGTCATGTTTTCGATCTTGGCGTTCTTCAATTCAAAATCTGGTGGATGATACCACGTTTTGGGAGATCTGCCAGTGATGTTCCAGTGGAAACTCAATTGCTGCTCCTGGAAGCCAAAGAAGAATCTGCGCTTGAGGATGAGCTTTCTTCTGACTGTGAAGAGGCAGCTACAGATAACACTTGCTACATTCTCTTCTTGCCTGTTTTGGATGGACAGTTTCGCGCAACTTTGCAAGGAACTCAGTCTAACACGCTCCAGTTTTGCATTGAAAGTGGAGATGCCCATGTTCAAACTTCCCAATCACTAGAAGCAGTATTTGTAAATTCAGGGGACAATCCATTTGAGTTAATCAGGGATTCTATCCAGATATTGGAGAAACACAAAGGGACTTTCTGTCATCTTGAAAACAAGAGGATTCCTGTACATCTTGACTGGTTTGGATGGTGCACTTGGGATGCTTTTTACACTGAAGTGAGTCCACAAGGAATAAAAGAGGGCCTTCAAAGTTTCTCAAATGGAGGTTGTTCGCCAAAGTTTGTCATTATTGATGATGGATGGCAAGAGATCCTCAACACATTTCACAAAGAAGGCGAACCAGTGATCGAGGGAACCCAGTTTGCAACCAGACTAACAGACATCAAAGAAAACAAAAAGTTCATCAATGTGGGCTCTGAGAATTCGTGCAGAAATCTCCACGACTTTGTTCACTCTATCAAAAATACTATGAACGTAAAATACGTTTACATGTGGCATGCTTTAGCTGGTTACTGGGGAGGTGTACTCCCATCATCAGATACAATGAAGAAGTATAATCCAAAGCTTGCATATCCAATTCAGTCACCTGGTGCCACTGGGAACCTTAGAGATATAGCCATGGACAGCTTGGAAAAATATGGAGTGGGAATCATTGACCCAGAAAATGTAGATGACTTCTACAATGACTACCACAGTTACCTTGCCAGCTGTGGTGTGGATGGAGTCAAAGTAGATGTTCAAAATTTGACAGAAACTTTAGGTTCTGGGTACGGTGGTCGTGTTTCATTGACCAAACGGTATCAGGAAGCATTAGAGCATTCTGTAACAAGGAACTTCAAGGACAACAACCTCATTTGTTGCATGTCTCACAACTCTGATTCAATTTACAGTTCAAAGAAAAGTGCAACAGCAAGAGCATCTGAGGATTTCATGCCAAGAGAACCAACATTTCAAACCTTACTCATTGCCTCTGTCGTGTTTAACAGTCTTCTTCTGGGAGAGATATTTGTGCCAGACTGGGACATGTTCCATAGCAAGCACGAGACAGCGGAGTTTCATGCTGCAGCAAGAGCAATAGGCGGTTGTGCAATATATGTAAGTGACAAACCTGGCAATCATGATTTTAAAATCCTCAAGAAGCTAGTTCAACCAAATGGATCAGTCTTGAGAGCAAGATTTGCTGGTCGTCCTACTCGAGATTGTTTATTTGAAGACCCCGTGATGGATGGTAAAAGTTTGCTGAAAATTTGGAATTTGAATGCACTCACCGGGGTGGTAGGCATCTTCAATTGCCAAGGAGCAGGAAGCTGGCCACTGAAATCATTGGAACCTGCACCCTTGCGCATAACCATTTCAGGGAAAGTGAGACCCCTTGATGTTGAATTTCTTGGAGAGGTTGCTGGAGAAAATTGGAATGGAAATTGCATAGTATATGCCTTCAATGCAGGCTTGCTTTCCATGGTATCTCTTAGAGGAAAACTTGAAGTTTCCCTGGAGACACTCCAATGTGAAATATATACAGTCTCTCCGATAAGGGTGTTTGGTCATGGTGTGCACTTTGCACCAATAGGATTGCTTGACATGTACAACTCGGGAGGAGCAGTAGAAGCCTTGGACTGCACCATGGATGTTGCACAGTGCATCATAAAAATCAAAGGCAGAGGATGTGGCCGTTTTGGAGCCTACTCCAACGCTAGACCAAAGCGTTGTGTCGTGGACATGAAGGAGGAGGAGTTCTCCTACAACCCTGACTATGGATTTTTGACGTTTAAACTTGATGGTGAAGGCAACTCAAGGGATATAGAATTTGTATACTCAGGTGACTCGATAAAGTCAAAGTGA 2235 0.4367 MTVRVKDGRCTVRGKVVLSHVPGNIVVSPVGTESAFLGATSTVSSSRHVFDLGVLQFKIWWMIPRFGRSASDVPVETQLLLLEAKEESALEDELSSDCEEAATDNTCYILFLPVLDGQFRATLQGTQSNTLQFCIESGDAHVQTSQSLEAVFVNSGDNPFELIRDSIQILEKHKGTFCHLENKRIPVHLDWFGWCTWDAFYTEVSPQGIKEGLQSFSNGGCSPKFVIIDDGWQEILNTFHKEGEPVIEGTQFATRLTDIKENKKFINVGSENSCRNLHDFVHSIKNTMNVKYVYMWHALAGYWGGVLPSSDTMKKYNPKLAYPIQSPGATGNLRDIAMDSLEKYGVGIIDPENVDDFYNDYHSYLASCGVDGVKVDVQNLTETLGSGYGGRVSLTKRYQEALEHSVTRNFKDNNLICCMSHNSDSIYSSKKSATARASEDFMPREPTFQTLLIASVVFNSLLLGEIFVPDWDMFHSKHETAEFHAAARAIGGCAIYVSDKPGNHDFKILKKLVQPNGSVLRARFAGRPTRDCLFEDPVMDGKSLLKIWNLNALTGVVGIFNCQGAGSWPLKSLEPAPLRITISGKVRPLDVEFLGEVAGENWNGNCIVYAFNAGLLSMVSLRGKLEVSLETLQCEIYTVSPIRVFGHGVHFAPIGLLDMYNSGGAVEALDCTMDVAQCIIKIKGRGCGRFGAYSNARPKRCVVDMKEEEFSYNPDYGFLTFKLDGEGNSRDIEFVYSGDSIKSK 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02045 744 Gene3D Aldolase class I 190 516 IPR013785 -
Spst9g02045 744 SUPERFAMILY (Trans)glycosidases 188 514 IPR017853 -
Spst9g02045 744 PANTHER - 3 726 IPR008811 -
Spst9g02045 744 Pfam Raffinose synthase or seed imbibition protein Sip1 3 722 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02045 Spst-Chr9 41009798 41013494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02045 3 723 Glycoside Hydrolase AT1G55740 47.727 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02045 - - gmx:100816978 1298.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02045 9 41009798 41013494 Spst9g02045 9 41009798 41013494 ECH