Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02043 ATGCACACTCAAATTCTCAAGAAAAAACTACTGTTATGTGATCCTTGTAGGTTTGTCCCATTTGCCTCACCGATCCTAAGGATATGGCCTTTGGTTGCGGACATCAACGATGGTGCCAATGTGAGACCCTCTGAGGGGAGGAGAGGGCAGTGGCAACTGCTCCTTAACAACACCGGCGTTGTTGGCATGCATGTGGCTTTAACCTACAAAAACACAGTCATTATTTTTGATCAAACTGGAGCTGGCCCATCTCGTTACCAACTTCGCAGACGCTTCAGTGGAAGCACATGCACCAGAAGCAACCATGATAGGATGGACTCCACGTGCTATGCTCATTCTGTAGAGTATGACATTAGTACCAACAAAGTGAGGCCTCTGAGGCTTGACACTGATCCTTGGTGCTCCTCTGGTTCATTCCTAAGCAATGGTACTCTTTTACAAACAGGTGGTAATGAAAAAGGTACCAGAAGGATCAGACAATTTAGGCCCTGTGAGAATGGCCAATGTGACTGGCTGCAATCAAAGAAAACACTATCTGATAAGAGGTGGTATGCTTCTAGTCAGTTACTACCAGAACATGATAGGGTGGTTGTTGTTGGCGGAAAAAGAGCTTTCACATATGAATTTGTACCAAAAATTAGTCCCGGAGAAAATTTCTTTGACCTTCCATTCTTGCACCAAACTAATGACAATAATGAAGGAGGGAACAACCTATATCCCTTCCTTCACCTTTCATCAGATGGAAACTTGTTTGTTTTCGCCAACCGCGATTCCATCCTACTCAACTTGAGAAGAAACAAAGTGATCAAAACCTTCCCTCGGATTCCAGGAGAAGGGTCAAGAAACTATCCAAGCTCAGGCTCATCTGTGATACTCCCACTGGACCATAGAGACAACTTCCAAAAGGTGGAAGTTATGGTTTGTGGAGGTTCATCTACTGGAGCCTTTACAGCTGCTGCTAAGGGACGATTCTTGGAAGGGTTAAGATCATGTGGAAGAATGGTGATCACAGGAAACAATCACAAGTGGGATATGGAGAACATGCCCAAGCCACGTCTCCTACATGACATGCTTATTCTCCCTAAAGGTGACATCCTAATTATAAATGGGGCTGAACATGGGTGTGCAGGATATGACAATGCTAGAAATGCTTCTCTTGAACCTTATCTCTATAGCCCCAACAGAAGACTTGGAGCAAGGTTTACGGTCCTTATGTCCACCAAGATAGCCAGAATGTATCACTCATCAGCAGCTCTTCTTCCTGATGGGAGAGTCTTGGTTGCGGGTAGTAACCCTCATGGGAGGTACATTTTTCACAATGTGGCATTCCCAACTGAGCTAAGACTTCAAGCATTTGTTCCACACTATATGGAAAGGAGGTATCATAACATGAGGCCTAGTAACTTGACCATAGAATATGGTGGTGGCAGCCATGCAATTGAGTATGGGAAAGAGTTTAGAGTTAGGTTCTTCCTAGAGAGGAAGCCTAGCAACGAGATGGAGTTCAGTGCCTATGCACCACCATTTACCACTCATTCCCTTGCCATGAATCAGAGGATGCTGAAGCTGAGGTGCAAGAGCTTGGTGAGAAATGGTGATAGGTGGGTGGTTGCAGTCTTGGAAGCCCCACCATCTTCCCTTGTTGCACCTTCTGGTTACTACATGCTCACGGTTGTCAATGGTGGAATCTCAAGCATGTCTGAGTGGGTTCAGTTTGGACACGCCTAG 1728 0.4537 MHTQILKKKLLLCDPCRFVPFASPILRIWPLVADINDGANVRPSEGRRGQWQLLLNNTGVVGMHVALTYKNTVIIFDQTGAGPSRYQLRRRFSGSTCTRSNHDRMDSTCYAHSVEYDISTNKVRPLRLDTDPWCSSGSFLSNGTLLQTGGNEKGTRRIRQFRPCENGQCDWLQSKKTLSDKRWYASSQLLPEHDRVVVVGGKRAFTYEFVPKISPGENFFDLPFLHQTNDNNEGGNNLYPFLHLSSDGNLFVFANRDSILLNLRRNKVIKTFPRIPGEGSRNYPSSGSSVILPLDHRDNFQKVEVMVCGGSSTGAFTAAAKGRFLEGLRSCGRMVITGNNHKWDMENMPKPRLLHDMLILPKGDILIINGAEHGCAGYDNARNASLEPYLYSPNRRLGARFTVLMSTKIARMYHSSAALLPDGRVLVAGSNPHGRYIFHNVAFPTELRLQAFVPHYMERRYHNMRPSNLTIEYGGGSHAIEYGKEFRVRFFLERKPSNEMEFSAYAPPFTTHSLAMNQRMLKLRCKSLVRNGDRWVVAVLEAPPSSLVAPSGYYMLTVVNGGISSMSEWVQFGHA 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02043 575 Pfam Galactose oxidase-like, Early set domain 478 571 IPR015202 -
Spst9g02043 575 SUPERFAMILY E set domains 461 572 IPR014756 -
Spst9g02043 575 Pfam Glyoxal oxidase N-terminus 63 310 IPR009880 -
Spst9g02043 575 Gene3D - 45 462 IPR037293 -
Spst9g02043 575 CDD E_set_GO_C 480 571 IPR015202 -
Spst9g02043 575 Gene3D Immunoglobulins 470 574 IPR013783 -
Spst9g02043 575 PANTHER SECRETED PROTEIN-RELATED 45 572 - -
Spst9g02043 575 SUPERFAMILY Galactose oxidase, central domain 114 457 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02043 Spst-Chr9 41004729 41007887 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02043 - - gmx:100814200 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02043 9 41004729 41007887 Spst9g02043 9 41004729 41007887 ECH