Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01990 ATGAGTTATTTTTCTGATGTGACCAACATTTGCTGGTTTTTGGAGGCAGAGTTTGCGAGGGAAGTGGTGAGGTTGCACACAGTGGTGGGAAATGCTGTCACAGAAGGGCGTCACATTGTAGTTGGAACAGGTTCTTCTCAGCTATTTCTGGCTGCTCTCTATGCTCTCTCCCCAACTGATGCACCTGAACCAATCAGTGTTGTCTGTGCCTCCCCCTACTACTCATCGTACCCATCAATGACGAATCACTTGAAATCAGGACTTTACCAATGGGGTGGTGATGCTGAAAGTTTTGAGAAAGAGGGTCCCTACATTGAGCTGGTTACTTCACCAAATAATCCTGATGGACATGTAAGAAGATCTAAGGTCAACAGAAGCCAGGGAGTTTTGGTCCATGATCTTGCCTATTACTGGCCCCAGTACACTCCAATATCAGGACCTGCAGATCATGATCTTTCCCTTTTCACTGTCTCAAAAAGCACTGGCCATGCTGGAATGCGCATAGGGTGGGCTCTTGTGAAAGACAAAGAGGTAGCAAAGAAAATGACAAAATTCATAGAGCTGAATACAATTGGAGTGTCTAAGGATTCACAACTCAGGGCTGCTAAGGTTATTAGGGCAGTTTCTGACAGCTGGGAACAAGGAAACTCCCAAGAGGGGGAGTCATTCTTCAAGTTCAGCCACAAACAAATGGCCAACAGGTGGAAGCAACTGAGACTAATTGTGGAGCGTAGCGGCTTGTTTAGTTTGCCCAAATTTTCCCCAGCATTCTGCACTTTTTTCAAACAGGTCTTGGAGCCTCAACCAGCTTTTGTGTGGCTAAAGTGTGAGGGAAACGTGGAAGACTGCGAAAGCTTCCTTCGAGCACAAAACATCTTAACTAGAAGTGGAAAACACTTTGGGGTTAGCCCAAAATACGTAAGAATTAGCATGTTGGATACTGACGAAAATTTTAGTCACTTTCTAGAGAGACTTTCTGCATTACATTCGTGA 993 0.4491 MSYFSDVTNICWFLEAEFAREVVRLHTVVGNAVTEGRHIVVGTGSSQLFLAALYALSPTDAPEPISVVCASPYYSSYPSMTNHLKSGLYQWGGDAESFEKEGPYIELVTSPNNPDGHVRRSKVNRSQGVLVHDLAYYWPQYTPISGPADHDLSLFTVSKSTGHAGMRIGWALVKDKEVAKKMTKFIELNTIGVSKDSQLRAAKVIRAVSDSWEQGNSQEGESFFKFSHKQMANRWKQLRLIVERSGLFSLPKFSPAFCTFFKQVLEPQPAFVWLKCEGNVEDCESFLRAQNILTRSGKHFGVSPKYVRISMLDTDENFSHFLERLSALHS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01990 330 Gene3D - 14 213 IPR015421 GO:0003824
Spst9g01990 330 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 3 327 - -
Spst9g01990 330 Gene3D Aspartate Aminotransferase, domain 1 214 330 IPR015422 GO:0003824
Spst9g01990 330 SUPERFAMILY PLP-dependent transferases 8 327 IPR015424 -
Spst9g01990 330 CDD AAT_like 17 325 - -
Spst9g01990 330 Pfam Allinase 1 328 IPR006948 GO:0016846
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01990 Spst-Chr9 36566597 36569403 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01990 K16903 - gmx:100820582 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01990 9 36566597 36569403 Spst9g01990 9 36566597 36569403 ECH
Spst3g04528 3 96968229 96973652 Spst9g01990 9 36566597 36569403 PCT