Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01948 ATGTCCAGTCTGGATGGGGCACCTCCAACACTGACGCGGCGCCCATCGAGAAGCGCCGCCACGACGTTCTCCACGGAAGTTTTTGACAACGAAGTCGTTCCGTCCTCTCTCGCCTCCATCTCGCCGATTCTCCGAGTCGCCAATGAGATCGAAAGCGAACGCCCTAGGGTTGCGTATCTATGTCGGTTCTATGCTTTCGAGAAGGCGCACCGGTTGGATCAGAGCTCCAGCGGACGTGGTGTGAGGCAGTTTAAGACGCTGTTGCTGCAGCGATTGGAGAGGGACAATGGATACAGTCTTATCGCGCGTGTTAAGAAAACAGATGCAAGGGAAATCCAGGCTTATTATCAGCAATACTATGAGCATTATGTCAGAGCCCTTGACCAAGGAGAGCGGGCAGACAGAGCACAGCTTGGGAAAGCTTACCAGACCGCCGGGGTGCTTTTTGAAGTGCTTTGTGCCGTTAACAAAACTGAGAAGGTCGAAGAAGTAGCTCCTGAGATCATTGCGGCTGCTAGAGATGTCCAGGAAAAGACGGAGATATATGCACCTTTCAACATTCTTCCGTTGGATTCAGCTGGGGCTTCTCAGCCTATTATGCTGCTTGAAGAGATTAAGGCAGCTGTTTCTGCGTTCCGGAATACTCGTGGCCTGACTTGGCCAAGTTTATTTGAGCAACAAAGGCAGAGAACGGGAGATTTGGATCTGCTTGATTGGCTTAGAGCCATGGACAACGTCAGGAACCAGAGAGAGCATTTGATCCTACTTCTTGCTAACTCTCACATAAGGCTGAACCCCAAACCTGAGCCTCTTAACAAGCTTGATGATCGCGCCATTGATTCAGTGATGAATAAGCTGTTTAAGAATTATAAAACGTGGTGCAAATTTTTGGGACGAAAGCATAGTTTACGATTCCCTCAAGGTCATCAAGAGATACAGCAAAGGAAGTTACTTTATATGGGCTTATATCTTCTCATATGGGGTGAAGCATCCAATGTTCGCTTCATGCCAGAGTGTCTCTGCTACATATTTCATAATATGGCATATGAACTTCATGGTTTATTGGCTGGAAATGTCAGCATTGTTACTGGTGAAAACATCAAACCTTCTTATGGTGGTGATGACGAGGCATTCTTGCGCAAGGTTATAACTCCTATATACCGAGTAATAGAAAAGGAAGCCAAGAAGAGCAGACATGGAGCAGCTCCTCACTCAGCCTGGTGCAACTATGATGATCTAAATGAGTATTTCTGGTCACCTGATTGCTTTTCTCTTGGATGGCCCATGCGTGATGATGGTGATTTTTTTATATCAACATTTAATATGACACAGGGAAGAAAGGGTGCTCAGAAAAAATCTGGAAGAACTGGAAAATCAAATTTTGCCGAGACCCGATCATTTTGGAACATCTTTCGCAGTTTTGATCGTCTATGGACCTTCTATCTGCTAGCTTTGCAGGTGATGTTCATTATTGCCTGGGAAGGAATTTCGTTGTTGGATATCTTTCAGAAAAAGGTCTTATATAATCTCTCTAGCATATTCATTACGGCAGCCATTCTGCGCTTACTTCAAAGTATCTTGGACCTGGCTTTGAACTTTCCAGGCTATCATCGTTGGAGATTCACTGATGTCCTACGAAATTTTCTCAAAGTCGTTGTTAGTCTTTTTTGGGTTATTGCTCTTCCACTCTTCTATGTGCATTCCTTCAACGATGCACCCAACTTTATGAAGGATCTGCTTTCCTTTCTTCATCGTATAAAGGGGATTCCACCATTGTATATGTTTGCAGTTGCAGTTTATCTGCTTCCAAATTTACTAGCAGCTGTTCTCTTTCTTTTCCCAATGCTTAGGCGTTGGATTGAAAACTCAGACTGGCACGTAGTTAGATTTTTCTTATGGTGGTCACAGATTAAACCTCTGATTCAGCCAACTAAGGACATAATGAGTATTCGGCATGTTGATTTTGCTTGGCATGAAATTTTCCCCAAAGCTCAAAATAACTATGGTGCAGTTATTGCACTCTGGGCCCCTGTACTTATGGTTTATTTCATGGACACTCAAATTTGGTATTCCATCTTTTCGACTATTTGCGGTGGTGTTATTGGAGCCTTTGATCGTCTAGGAGAGAGTGTGAGCCTCGCTAAGATGCCAGCTCTCAGAGGTAATCGAATACGCACTCTGACCATGCTAAGGTCGCGTTTCCAATCATTGCCTGGTGCATTCAACACATACTTGGTTCCTACTGACAAGAAGCAGAAGAAGAAATTTTCTTTCTCGAAGCGATTTGCCGAGATTTCTGCAAGCAGAAGGAGTGAAGCTGCTAAATTTGCTCAATTATGGAATGAAGTTATTTGCAGTTTCCGGGAGGAAGATATCATAAGTGATAGGAAAGGCCATAAAACCAAACTCTTCAATTACTTGGAGATGGATCTTTTGATGGTTCCATACTCATCAGATCCTAGCTTGAAAACAATTCAATGGCCACCATTTCTGCTTGCAAGCAAGATTCCTATAGCACTGGACATGGCAGCTCAGTTCAGAGGAAAGGACTTTGATCTATGGAAGCGCATATGTGCAGATGAATATATGAAGTGTGCAGTGATTGAATGCTACGAATCATTTAAAAACATCCTGCATGCTTTGATAGTTGGAGAAGCTGAAAAAAGAACAATCTCTATCATCATTAAGGAAGTTGAAAACAGCATCTCTAAGAATACACTTCTTTCAAATTTCCGAATGGGGTTTTTGCCTTCCCTTTGTAAGAAGTTTGTGGAGCTTGTGGAAATCTTGAAAGATGCAAATTCATCCAAGCAAGGTACAGTGGTGGTCTTGTTGCAAGATATGTTAGAAGTGTTTACACGTGATATGGTGGTAAATGAGATCAGTGAATTGGCAGAACTTAATCATAGTAGCAAGGATACTGGAAGGCAACTTTTTGCTGGTACAGATGCAAAACCAGCTGTACTATTTCCTCCTGTGGTTACAGCCCAATGGGATGAACAGATTAGACGTCTTTATTTACTTTTGACGGTTAAGGAATCTGCCATTGAGGTGCCAACAAACCTTGAGGCACGGAGAAGGATTGCATTCTTTACTAATTCATTGTTCATGGATATGCCACGTGCTCCACGAGTTCGTAAAATGCTGCCATTCAGTGTCCTAACTCCATACTACAGTGAAGAGACTGTCTACTCGAAGAATGACCTTGAGGTTGAAAATGAAGATGGTGTCTCAATCATATATTACCTGCAAAAGATCTACCCTGATGAGTGGAATAACTTGATGGAACGGCTTGGTTGTAAGAAAGATAGCGAGATATGGGAGAAAGATGAACACATATTACAGCTACGTTACTGGGCCTCGTTACGAGGGCAAACTCTTTGTAGGACAGTTAGGGGAATGATGTACTACCGGCGGGCTATTAAGCTGCAGGCTTTTCTTGATATGGCAAATGAAGAGGAGATACTCTATGGCTATAAAGCTGTTAGTGTCCCGTCTGAGGAAGACAAAAAGAGCCATAGATCCTTATATGCTAGTTTAGAGGCCGTTGCTGACATGAAATTCACGTACGTGGCTACCTGTCAGAACTATGGGAATCAGAAGCGTAGTGGAGATCGTCGTGCGACAGACATTCTGAATTTGATGGTTAACAATCCCTCCCTTCGTGTGGCTTATATTGATGAAGTTGAAGAAAGAGAAGGAGGAAAAGTTCAGAAAGTTTATTACTCTGTACTAGTCAAAGCTGTGGACAATCTTGACCAGGAAATATTTCGAATAAAACTGCCGGGTCCAGCAAAGATAGGAGAAGGGAAGCCTGAAAATCAAAATCATGCCATCGTTTTTACAAGAGGCGAAGCTCTTCAGACTATTGACATGAACCAGGATAATTACTTGGAAGAAGCTTTAAAAATGCGCAATCTTTTGGAAGAGTTTACTGAGGATCATGGAGTGCGCCGACCTACAATATTAGGTGTTCGTGAACACATCTTTACTGGCAGTGTATCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACAAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCACTGAAGGTGCGATTCCACTATGGTCATCCAGATGTTTTTGATAGAATTTTCCACATAACTCGAGGAGGAATTAGCAAGGCTTCTTGTGGCATCAATCTGAGCGAGGATATTTTTGCTGGATTCAACTCCATTCTAAGACGCGGAAATATCACTCATCATGAATATATCCAATGCGGAAAGGGTAGAGATGTTGGGCTCAATCAAATCTCACTTTTTGAAGCAAAAGTGGCTTGTGGCAACGGAGAGCAGACATTAAGCAGAGATATCTACAGGCTGGGGCATCGTTTTGACTTTTTCCGCATGCTATCATTCTATTTCACGACCATTGGATTTTATATAAGCTCAATGATCGTGGTCCTCACATGTTATGCATTCCTATATGGCAAACTATACCTGTCTTTGAGTGGATTTGAGGCTGCAATAGTAAAGTTGGCTAAGAGAGAGGGAGAAGAATCACTAAAATCAGCATTAGCTTCGCAATCCCTTGTTCAAATAGGACTTGTAATGACTTTGCCCATGTTCATGGAAATTGGACTAGAGAGAGGGTTCAGAACTGCTGTAGGGGAGCTCATAATAATGCAGTTGCAGCTAGCACCTGTTTTCTTCACTTTCTCCCTAGGGACAAAGCTACACTATTATGGGCGTACTCTTTTGCATGGAGGGGCTAAGTACAGAGCAACCGGCCGTGGTTTTGTTGTTCGACATGAGAAGTTTGCTGAAAATTACAGGATGTACTCTAGAAGTCACTTTGTTAAAGGAATTGAGCTCGCAATTTTGCTCATATGTTATAAGATTTATGGATCAGCAGCTCCGGATTCAACATCATATGGGCTTCTCTCGTGGTCAATGTGGTTTTTGGTCTGTTCATTTTTGTTTTCTCCTTTCCTTTTTAATCCATCAGGGTTTGAATGGCAGAAGATAGTTGAGGACTGGGATGATTGGCAAAAGTGGATAAGTATTCGAGGTGGCATTGGTGTTCCTTCAAACAAGAGTTGGGAATCATGGTGGAATGAAGAACAAGAACATCTGCAGCACACTGGGTGTCTGGGGCGGATATGTGAGATTATTCTTGACCTGCGTTTCTTTGTCTATCAGTATGGAATTGTGTATCATCTCAATGTAGCCAGAGGTGACAAGAGCATCTTGGTTTATGCTTTGTCCTGGATAGTGATGGTAGCTCTCATGGTTATCCTTAAGATTGTGTCCATGGGTAGAAAGCAGTTCAGCGCAGACTTCCAGTTGATGTTTCGTCTTGTCAAATTGTTTCTGTTCATTGGAGCCATTGTTGCTCTATGTCTAATGTTTACTCTTCTGAGTCTCACAGTTGGAGACATCTTTGCCAGCCTCCTAGCCTTTTTGCCAACAGCATGGGCACTTATTCAGATAGCACAAGCATGCAGGCCATTCGTGAAGGGCATTGGAATGTGGGGGTCTGTCAAATCTTTAGCAAGAGGCTACGAATACTTGATGGGAGTGGTTATTTTTGCACCAGTGGCCATATTGGCTTGGTTCCCATTTGTTTCAGAATTCCAAACTAGGCTGCTGTTCAACCAAGCATTCAGCCGAGGGCTTCAAATCCAGCGAATTCTGGCTGGCGGCAAGAAGAATAAGTAG 5691 0.4293 MSSLDGAPPTLTRRPSRSAATTFSTEVFDNEVVPSSLASISPILRVANEIESERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNGYSLIARVKKTDAREIQAYYQQYYEHYVRALDQGERADRAQLGKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYAPFNILPLDSAGASQPIMLLEEIKAAVSAFRNTRGLTWPSLFEQQRQRTGDLDLLDWLRAMDNVRNQREHLILLLANSHIRLNPKPEPLNKLDDRAIDSVMNKLFKNYKTWCKFLGRKHSLRFPQGHQEIQQRKLLYMGLYLLIWGEASNVRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVITPIYRVIEKEAKKSRHGAAPHSAWCNYDDLNEYFWSPDCFSLGWPMRDDGDFFISTFNMTQGRKGAQKKSGRTGKSNFAETRSFWNIFRSFDRLWTFYLLALQVMFIIAWEGISLLDIFQKKVLYNLSSIFITAAILRLLQSILDLALNFPGYHRWRFTDVLRNFLKVVVSLFWVIALPLFYVHSFNDAPNFMKDLLSFLHRIKGIPPLYMFAVAVYLLPNLLAAVLFLFPMLRRWIENSDWHVVRFFLWWSQIKPLIQPTKDIMSIRHVDFAWHEIFPKAQNNYGAVIALWAPVLMVYFMDTQIWYSIFSTICGGVIGAFDRLGESVSLAKMPALRGNRIRTLTMLRSRFQSLPGAFNTYLVPTDKKQKKKFSFSKRFAEISASRRSEAAKFAQLWNEVICSFREEDIISDRKGHKTKLFNYLEMDLLMVPYSSDPSLKTIQWPPFLLASKIPIALDMAAQFRGKDFDLWKRICADEYMKCAVIECYESFKNILHALIVGEAEKRTISIIIKEVENSISKNTLLSNFRMGFLPSLCKKFVELVEILKDANSSKQGTVVVLLQDMLEVFTRDMVVNEISELAELNHSSKDTGRQLFAGTDAKPAVLFPPVVTAQWDEQIRRLYLLLTVKESAIEVPTNLEARRRIAFFTNSLFMDMPRAPRVRKMLPFSVLTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIYPDEWNNLMERLGCKKDSEIWEKDEHILQLRYWASLRGQTLCRTVRGMMYYRRAIKLQAFLDMANEEEILYGYKAVSVPSEEDKKSHRSLYASLEAVADMKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGGKVQKVYYSVLVKAVDNLDQEIFRIKLPGPAKIGEGKPENQNHAIVFTRGEALQTIDMNQDNYLEEALKMRNLLEEFTEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGISKASCGINLSEDIFAGFNSILRRGNITHHEYIQCGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMLSFYFTTIGFYISSMIVVLTCYAFLYGKLYLSLSGFEAAIVKLAKREGEESLKSALASQSLVQIGLVMTLPMFMEIGLERGFRTAVGELIIMQLQLAPVFFTFSLGTKLHYYGRTLLHGGAKYRATGRGFVVRHEKFAENYRMYSRSHFVKGIELAILLICYKIYGSAAPDSTSYGLLSWSMWFLVCSFLFSPFLFNPSGFEWQKIVEDWDDWQKWISIRGGIGVPSNKSWESWWNEEQEHLQHTGCLGRICEIILDLRFFVYQYGIVYHLNVARGDKSILVYALSWIVMVALMVILKIVSMGRKQFSADFQLMFRLVKLFLFIGAIVALCLMFTLLSLTVGDIFASLLAFLPTAWALIQIAQACRPFVKGIGMWGSVKSLARGYEYLMGVVIFAPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKNK 1896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01948 1896 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 316 427 IPR026899 -
Spst9g01948 1896 SMART FKS1_dom1_2 314 430 IPR026899 -
Spst9g01948 1896 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 901 914 IPR004838 GO:0003824|GO:0009058|GO:0030170
Spst9g01948 1896 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 106 1891 - -
Spst9g01948 1896 Gene3D - 24 188 IPR023175 -
Spst9g01948 1896 FunFam callose synthase 3 25 182 - -
Spst9g01948 1896 Pfam 1,3-beta-glucan synthase component 1109 1712 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Spst9g01948 1896 Pfam 1,3-beta-glucan synthase component 1018 1104 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Spst9g01948 1896 Pfam Vta1 like 39 167 IPR039431 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01948 Spst-Chr9 28623768 28637576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01948 8 1896 Glycosyltransferase AT1G05570 58.363 0.0 2293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01948 K11000 - gmx:100777245 3467.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01948 9 28623768 28637576 Spst9g01948 9 28623768 28637576 ECH
Spst3g01305 3 16477362 16494183 Spst9g01948 9 28623768 28637576 PCT