Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01929 ATGTGGCGTCGAAGCTTCTCCAAACTTCCCCTTAGAGCCTCGGTTTTAGGCTTTCTGACGCGATCGTTCTCCCGTGAGGCGGGGAAAAGGTTCGCCGCGTTGTGGGGGAACGGCGACTACGGCAGATTGGGTCTCGGCAACTTGGATTCGCAATGGAAACCCGTCGTTTGCCCCGCCTTCCGCAACCAAACCCTCAATGCCATTGCTTGTGGTGGTGCTCACACTCTCTTCTTAACAGACGATGGATGTGTTTATGCGACTGGTCTTAATGATTTTGGGCAACTTGGTGTCTCAGAGAGTAAGCACTACTCAGTGGAACCGGGGAAAATTTATCTGACTGCATTTTCTGTGTTTGGAATATCTCAGGACCCACTTCTTGTTTTTGGAGAGGAGAAGAAAGTTGTGCAGATCTCTGCTGGTTATAGTCATTCTTGTGCGATAACAGTGGATGGAGAGCTTTACATGTGGGGAAAGAATACAAGTGGGCAGCTTGGACTTGGAAAACGTAACAACTAA 516 0.4903 MWRRSFSKLPLRASVLGFLTRSFSREAGKRFAALWGNGDYGRLGLGNLDSQWKPVVCPAFRNQTLNAIACGGAHTLFLTDDGCVYATGLNDFGQLGVSESKHYSVEPGKIYLTAFSVFGISQDPLLVFGEEKKVVQISAGYSHSCAITVDGELYMWGKNTSGQLGLGKRNN 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01929 171 SUPERFAMILY RCC1/BLIP-II 35 168 IPR009091 -
Spst9g01929 171 Gene3D - 27 171 IPR009091 -
Spst9g01929 171 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 30 81 IPR000408 -
Spst9g01929 171 Pfam Regulator of chromosome condensation (RCC1) repeat 134 163 - -
Spst9g01929 171 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 82 150 IPR000408 -
Spst9g01929 171 Pfam Regulator of chromosome condensation (RCC1) repeat 35 78 IPR000408 -
Spst9g01929 171 PRINTS Chromosome condensation regulator RCC1 signature 31 47 IPR000408 -
Spst9g01929 171 PRINTS Chromosome condensation regulator RCC1 signature 151 167 IPR000408 -
Spst9g01929 171 PRINTS Chromosome condensation regulator RCC1 signature 84 100 IPR000408 -
Spst9g01929 171 PRINTS Chromosome condensation regulator RCC1 signature 65 78 IPR000408 -
Spst9g01929 171 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 151 171 IPR000408 -
Spst9g01929 171 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 32 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01929 Spst-Chr9 27457164 27458508 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01929 - - vun:114196144 280.796