Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01925 ATGATCGCCTCCACCTCCAACATTGGAACTCATCCTCTGTGTTTTCTCTTCAAACCAGCCACACAGGCGACAACTGGGTTTCTTTCTCTTACACTCCACTCTCGAGGTATTGCTGTTGCACTGTCCTCGTCGTCAACTAGGACCACCCAGAGGCTCACGTGCCACTTCAACGGCAAAGATGGAAGCTTTGAGCAGCAAGAGGAAGAGGGTGAGCGTGAGGTGCTTTGTGACGTCCAAGTGGTATCGTGGAGGGAACGCAGAGTTCACGCCCAAATCACAGTCGATGCTGACACTGAATCCGTTTGGAATGCTCTCACTGATTATGAGCGTCTCGCTGATTTCATCCCAAATCTTGTATGGAGTGGGAGAATTCCTTGTCCATACCCAGGAAGGATATGGTTAGAGCAAAGGGGATTCCAAAGGGCTATGTATTGGCATATAGAAGCTCGTGTTGTCTTGGATCTTCGAGAAGTTTTCAATTCACAATGGGATCGAGAACTTCACTTTTCCATGGTTGACGGGGACTTTAAGAAGTTTGATGGCAAATGGTCCGTAAAATCTGGAACAAGATCATCAACTGCTATTTTGTCGTATGAGGTTAATGTGATACCAAGATTCAATTTCCCAGCTATTTTTTTGGAAAGAATTATCAGATCTGATCTTCCTGTGAACCTTCGAGCTTTGGCATACAGAGCTGAAAAGAATTTTATGGGATATCAGAAACTTCCAGTATCGGAAAATCAGTTGCATAAAACTTATGTGGCCATTAACGGGTCATCTGTTAAAAAGATAAATGGTGCTTTGTTTGAAAGTGTTAAAAAGATAAATGGTGCTTTGTGTGAAAGTGATAAGTTGCCTCCTGCACAGAACAAAAGAGAAATTGCCTCCTCTGTTTCTGGTTCCATGCTCACATCTTCCAGTGAGGTGAGAAGCAACTGGGGTGTATTTGGAAAAGTTTGCAGGCTTGACAGACCGCGGATGGTGGATGAAGTTCATCTCCGCAGATTTGATGGACTTCTGGAAAATGGAGGTGTTCATCGTTGTGTTGTTGCAAGCATTACCGTTAAAGCTCCTGTTCGGGAAGTATGGAATATTCTAACTGCCTATGAGACTCTTCCTGAAGTAGTTCCAAATCTAGCAATCAGTAAAGTTGTATCACGAGATAACAATAAAGTCCGTGTTCTTCAGGAAGGGTGCAAGGGCCTACTTTATATGGTGCTTCATGCTCGCGTTGTGTTGGAATTGTGTGAATATTTAGAACAGGAGATCAGTTTTGAACAAGTTGAAGGGGACTTTGACTCGTTCCACGGAAAATGGATTTTTGAGCAACTAGGAAATCATCACACGCTGCTAAAGTACTCTGTGGAGTCAAAAATGCGCAAAGATACTTTCCTTTCTGAAGCCATCATGGAGGAGGTCATTTATGAAGATCTCCCATCAAACTTGTCTGCAATTAGAGACTATATTGAGAACAGGAATGCATCAAAATCTTCAGAATATAGTGAGCAGAATACAAATTCAGGGCAACAAATTGTTTCATCAGGCTTTCAAAATGATGACAACACTGGTTCAGCTGTGGAAGTTCCTAATTGTGATGCTCGATGTTCATCTCAGCAAAGACCTAAGGTGCCAGGCTTACAGAGGAATATTGAAGTACTAAAATCTGAACTCCTGCAATTCATTGCAGAACATGGACAGGAAGGATTCATGCCAATGAGGAAGCAACTTCGTTTGCATGGAAGAGTAGATATTGAGAAGGCTATAACTCGCATGGGTGGGTTCAGAAAGATTGCAACTGTATTGAACCTTTCTTTGGCTTACAAACACCGCAAACCAAAGGGTTACTGGGACAATCTTGAAAATTTACAGGAAGAGATAAGTAGGTTTCAAAGGAGCTGGGGAATAGACCCTTCATTCATGCCAAGTAGAAAGTCATTTGAACGAGCAGGGAGGTATGATATTGCGCGTGCTCTGGAGAAATGGGGTGGACTACATGAGGTTTCACGGCTTCTCTCTCTGAAGGTAAGACAAAGGAGCAGACATGACAACCATGGTAAGGATAAGAAGAGTGATCATACAGACAGTGAGATGAAGACGCCATATGGAGTGCTGGCAGTGACTTATTCTGGCCCCCCACAACCTAAGTTGACGAAGGAACAAGGGAAAACACAATCTGATAATGGTACCGTTGTTCTTTCCTCACCCCTGTTGGCATGTGGTGAACTTGTAGCTCTTAGGCAAATCCATTTACACCATCAATTGCTAACATTGGCCTTCTTCAGAAACTTGGATTTGCACGCCGTTATGATTTTGCATAATTTTCAGTTTCTTTTGGGAACTAATTTTCTGATTTGTAATACATTAGCCAATATGAAACTTCAGTTTGGTGGGATTTGTAAGGTCAGTCTGCTTGGGTGCAGGCAACTGGTGTTGGTAATGGCAACCACGGCCTGTTTCATCATCGTTAGCAGAAATGACATTCCTATATATGAAGCTGAAGTTGGAGTAGCTGCTAAAAGAGAGGACGCAGCTCAGCTGCATCAATTTATCCTCCATGCTGCTCTAGATATTGTTCAGGACCTTGCATGGACTACCAGTGCGATGTACTTGAAATCGGTAGACAGGTTTAATGAACTTGTGGTGTCCGTGTATGTTACAGCTGGTCATATCCTTCATATATGTGGTTTATTTATTGATGAGATAAAAAAACTTGTATGGCTCTTATTATTGATGTTGCTACATGACTCTCGTAATGATGATGGCATTAAAAGTTTCTTCCAAGAGGTGCACGAGCTTTACATAAAGATTCTCCTCAATCCCTTGTATTTGCCTGGCTCCCGGATCACGTCCTCACATTTTGATACTAAAGTCCGAGCTCTTGCACGAAAGTGGTTGTTGATTTTGCTAATGAAGGCTATTGTCGAGAAACTATTCGATATTTCGAGTACTAGTGGCTACATTTGTAATACATATTAA 2976 0.4234 MIASTSNIGTHPLCFLFKPATQATTGFLSLTLHSRGIAVALSSSSTRTTQRLTCHFNGKDGSFEQQEEEGEREVLCDVQVVSWRERRVHAQITVDADTESVWNALTDYERLADFIPNLVWSGRIPCPYPGRIWLEQRGFQRAMYWHIEARVVLDLREVFNSQWDRELHFSMVDGDFKKFDGKWSVKSGTRSSTAILSYEVNVIPRFNFPAIFLERIIRSDLPVNLRALAYRAEKNFMGYQKLPVSENQLHKTYVAINGSSVKKINGALFESVKKINGALCESDKLPPAQNKREIASSVSGSMLTSSSEVRSNWGVFGKVCRLDRPRMVDEVHLRRFDGLLENGGVHRCVVASITVKAPVREVWNILTAYETLPEVVPNLAISKVVSRDNNKVRVLQEGCKGLLYMVLHARVVLELCEYLEQEISFEQVEGDFDSFHGKWIFEQLGNHHTLLKYSVESKMRKDTFLSEAIMEEVIYEDLPSNLSAIRDYIENRNASKSSEYSEQNTNSGQQIVSSGFQNDDNTGSAVEVPNCDARCSSQQRPKVPGLQRNIEVLKSELLQFIAEHGQEGFMPMRKQLRLHGRVDIEKAITRMGGFRKIATVLNLSLAYKHRKPKGYWDNLENLQEEISRFQRSWGIDPSFMPSRKSFERAGRYDIARALEKWGGLHEVSRLLSLKVRQRSRHDNHGKDKKSDHTDSEMKTPYGVLAVTYSGPPQPKLTKEQGKTQSDNGTVVLSSPLLACGELVALRQIHLHHQLLTLAFFRNLDLHAVMILHNFQFLLGTNFLICNTLANMKLQFGGICKVSLLGCRQLVLVMATTACFIIVSRNDIPIYEAEVGVAAKREDAAQLHQFILHAALDIVQDLAWTTSAMYLKSVDRFNELVVSVYVTAGHILHICGLFIDEIKKLVWLLLLMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDTKVRALARKWLLILLMKAIVEKLFDISSTSGYICNTY 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01925 991 PANTHER POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN 73 629 - -
Spst9g01925 991 Gene3D - 87 236 IPR023393 -
Spst9g01925 991 CDD TRAPPC2_sedlin 816 965 - -
Spst9g01925 991 SUPERFAMILY Bet v1-like 350 493 - -
Spst9g01925 991 Pfam Polyketide cyclase / dehydrase and lipid transport 94 228 IPR005031 -
Spst9g01925 991 Pfam Polyketide cyclase / dehydrase and lipid transport 355 486 IPR005031 -
Spst9g01925 991 Gene3D - 811 967 - -
Spst9g01925 991 SUPERFAMILY SNARE-like 813 965 IPR011012 -
Spst9g01925 991 Gene3D - 340 499 IPR023393 -
Spst9g01925 991 SUPERFAMILY Bet v1-like 87 234 - -
Spst9g01925 991 CDD SRPBCC_11 88 234 - -
Spst9g01925 991 MobiDBLite consensus disorder prediction 675 696 - -
Spst9g01925 991 CDD SRPBCC_11 349 490 - -
Spst9g01925 991 MobiDBLite consensus disorder prediction 496 529 - -
Spst9g01925 991 Pfam Sedlin, N-terminal conserved region 821 963 IPR006722 GO:0006888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01925 Spst-Chr9 27388793 27407999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01925 - - gmx:100812363 1253.43