Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01920 ATGTTCAATTTTGGATCCCACCGCCACCATGTGACCGGGATGTTTAGGGAGATGGTTTATTGTAGAGTGTTTGGCAATCCAAAAAATTTAGCAATGGAGCGGGGAGGGGTTTTGGGGCGGGAAGTGTTAGAGACATGGGGAGGTGTTGCTTTGCCTAAACTGTGGATGGACCAGAGGAGTTGGCTATGGTCCAGGAAGTCATCTGAGAAAAGTCCAGGTGAAACTGAGAGTTCTGGCTCAATGTCATCTCATTCAGAAAGATTTTCTGAAGATCAGGTATATCCCACAGAAACTACTCCATCTCCAGAAGTCACATGCGAGGGTGCACCAAATGATGAAGAAGTTACTGATGTGAAAACTCTTACGGAACAGTTATCTGCTGCTCTGTTAAACTCTAGTGCCAAAGAAGACTTAGTAAAGCAGCATGCAAAGGTTACTGAAGAAGCAGTCTCAGGCTGGGAGAAGGCTGAAAATGAAGTATTGATTTTAAAACAAGAACTTCACGCTGCAAAACAGGAAAATTCAGTTCTTGAAGACCAAATTAGTCATCTGAATGGGGCACTCAAGGAGTGTATGAGGGAGCTTCGACAAGCTAAAGAAGAACAGGAGCAAAGGATTCATGAAAATGTATCAAATAACTCTTGTGGCTTGAAATCCAGAAGACCTGATCATGGGTGGGAAGCTGTTGATGCTGCTGCTGCTGCAGCTGCATTAGCTCGCTCTGATCTTCACCAGAGGCTTGAGGATATGGAGAAAGAGAATTCAAGTCTTAAGGTAGAGCTACAATCTCGACTTGAGGAACTAGAGTTCAGGACCATAGAAAGGGATTTGAGTACTCAGGCTGCTGAAGCAGCAAGCAACCAACATTTGGAAAGTATAAAGAAGGTGGCTAAGCTAGAAGCCGAATGCCGGAGACTGAAAGCTGTGGCTCTCAAACCATTCTCTGCTAATGATCACAAGTCTTTAGCTGCTTCTTCAGTTTATGTGGAGTCATTTACTGATAGCATGTCAGATATTGGGGAGAGGCAACCAGTAGTTGAAAGTGATATGAGGAAATCAGAAACCTGGGATATGAATGACGCTGAATCAAACCACTATGGCTCATGGTCATCAGCTTTAATCACAGAACTTGACCCATTTAGGAATGAAAACACTGCCGGAAAAAATCATACTGTCTTTTCAACTGAGATCACTCTGATGGATGATTTCCTTGAAATGGAAAGGCTTGCTGCATTGCCAGATACTGAAAGTGTAAGTAGCTTTCCGGTGGTAAGTGCTGCATCTGACCAACTCAAAGTTGGCCATGGCACAATGAATGCTGATGTGGAAGCTATGGTTCAAAAGAATGTTGCACTGGAAAAGAAACTAGAGAAAATGGAGGCAGAGAAACTGGAGCTAGAGATGGATCTAATGGAGTACCAAAAGAAGCTTGAAGTATCATTGAACAGAATAAAGGAAATGGAGTTAGAGGTAGTAGAGCTTCAAACTAAGTTAGCTCTTGCAAAGAAATCAAATGAAGAAGCATATGAAAAACTAGAAGCAACTCAACAAAAGAAAGAGATAGCTGAGTCAAAACTCAGAGTTGCACACTCTGAAGCAGAAGAATTGGTTTCAAAAATTTGTTCATTAGAGGAAGAGATTGAGAAAGAGCGAGTTTTGTCAGCTAAGAATTTGGCCAAATATGAGGAGTTGGAGGATGAACTCTTGAGAATGAAGCATGAACTTCAACTCCAGCAAAACTTTGAGATTCTGTCCGAGGAAGGTGTTAATAGTGAGCTAAAGCAGGAGAAGGAACAAGCATTGGCTGCTACTAAATTTGCTGAATGCAGAAAAACCATTGAATCTCTTGGACTGCAGTTAAAGTCCCTTGCAACCTTGGAAGACTTCCTACTTGATTCAGAGAGCCCTATGGAGTTAACTTGTGAAGATACACCAGGTCACCAAAGTGGTGATGAGAAGTTGAAGAAGTTAGATAATTGTGCAGTTACACCAGGTCACCCATCACCTATTACCCATGAAAAAACCAGTAATAGTTTTGGTAGGTTGAATCCAAGAACCAAAAGTGTAAGCAAAACAAGAGGTCGCTGA 2088 0.421 MFNFGSHRHHVTGMFREMVYCRVFGNPKNLAMERGGVLGREVLETWGGVALPKLWMDQRSWLWSRKSSEKSPGETESSGSMSSHSERFSEDQVYPTETTPSPEVTCEGAPNDEEVTDVKTLTEQLSAALLNSSAKEDLVKQHAKVTEEAVSGWEKAENEVLILKQELHAAKQENSVLEDQISHLNGALKECMRELRQAKEEQEQRIHENVSNNSCGLKSRRPDHGWEAVDAAAAAAALARSDLHQRLEDMEKENSSLKVELQSRLEELEFRTIERDLSTQAAEAASNQHLESIKKVAKLEAECRRLKAVALKPFSANDHKSLAASSVYVESFTDSMSDIGERQPVVESDMRKSETWDMNDAESNHYGSWSSALITELDPFRNENTAGKNHTVFSTEITLMDDFLEMERLAALPDTESVSSFPVVSAASDQLKVGHGTMNADVEAMVQKNVALEKKLEKMEAEKLELEMDLMEYQKKLEVSLNRIKEMELEVVELQTKLALAKKSNEEAYEKLEATQQKKEIAESKLRVAHSEAEELVSKICSLEEEIEKERVLSAKNLAKYEELEDELLRMKHELQLQQNFEILSEEGVNSELKQEKEQALAATKFAECRKTIESLGLQLKSLATLEDFLLDSESPMELTCEDTPGHQSGDEKLKKLDNCAVTPGHPSPITHEKTSNSFGRLNPRTKSVSKTRGR 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01920 695 Coils Coil 282 302 - -
Spst9g01920 695 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 56 677 - -
Spst9g01920 695 Coils Coil 233 267 - -
Spst9g01920 695 Coils Coil 590 610 - -
Spst9g01920 695 Coils Coil 554 581 - -
Spst9g01920 695 Coils Coil 442 532 - -
Spst9g01920 695 MobiDBLite consensus disorder prediction 65 105 - -
Spst9g01920 695 Pfam Filament-like plant protein, long coiled-coil 432 625 IPR008587 -
Spst9g01920 695 Pfam Filament-like plant protein, long coiled-coil 240 308 IPR008587 -
Spst9g01920 695 Pfam Filament-like plant protein, long coiled-coil 135 215 IPR008587 -
Spst9g01920 695 Pfam Filament-like plant protein, long coiled-coil 359 419 IPR008587 -
Spst9g01920 695 MobiDBLite consensus disorder prediction 65 110 - -
Spst9g01920 695 MobiDBLite consensus disorder prediction 659 695 - -
Spst9g01920 695 MobiDBLite consensus disorder prediction 669 687 - -
Spst9g01920 695 Coils Coil 153 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01920 Spst-Chr9 26971907 26978790 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01920 - - var:108331982 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01920 9 26971907 26978790 Spst9g01920 9 26971907 26978790 ECH