Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01919 ATGGATTTCTTGAATCGTAAGGGTGTGGCTTACGGGCCTGTGAAGGATGTGGACTTAGGCCCCTATAGCAATGAATTCTACCTCCAAGCCAATGTCAAAGCTCCCCGCATGACTGGACTAGTGGTCAAGATTTTCACTCATCTGTTGGAGTGTCCAATAATTGGAACCTTCCTACTGTTCATATTGAAGGGAAACAATCTTATTCACCGGCTTATCACAAATGCAGAGTTCCAAGAACCGCCTCTCTTTGTTCCCTTGCATGATTTTGAAGACATAAAAGAAAGAGAAGTCAAATGCTTAGACTCTTCTTTGTCTCCACCGGAGAAAGTTCAACATGCACTAGATTGTTTGCCTATATCTTCAGAAGTAACACTTGATGGAGCAAATTCTTCATTCTGCCGATGGACAATAATGGATTATGCAAAAGCTTACCGCTCTGGGGAAATAACACCAAGCTTGGTTGCTGAACGATTTATTGCGGCTATTGATGAGTCCACAAAACCCTCCCTCAAAATGGGATTCTTTACTCACTATAGTGTTGATGATATTCTAAGACAAGCAGCTGAATCAACTCATCGACATCAAAGAGGGGAACCAATCTCCGTGTTAGACGGAGTTCCTGTTGCTATCAAGGATGAGATAGACTGTTTGCCATATCCAACAACAGGAGGAACAACGTGGCTGCACAAAGAAAGGCCGTGTAACGATGATGCCTGCTGCGTTAAGCGTCTAAGGTTATGTGGAGCCATACTTGTTGGGAAAACCAATATGCATGAACTTGGGTCCGGAACCAGTGGGATAAATCCACATTATGGGCCTGCTAGAAACCCATATGACACCAGTAAGATAGCAGGAGGTTCTTCTAGTGGATCTGCTTCTCTGGTGTCTGCCGGACTGTGTCCTGTTGCCCTTGGTGTTGATGGGGGAGGATCTGTAAGAATGCCAGCAGCTCTTTGCGGTGTTGTTGGTCTAAAACCAACTTTTGCACGCATACCACATGATGGAGTTCTTCCCCTAAATTGGACTGTTGGAATGGTTGGAATACTGGCAGGCACAGTTGAGGATGCATTGATTGTTTATGCAGCAATCAGTGGTGAAGTTCCATATCAGCATACCTTCAGTGTACTGACCAACATTAATCTTCCACGGCTGAGTTTGACAAAATCCATATCTGACATCAGATTAGCAAAATACGGAAAGTGGTTTGATGATTGCAGCCACGATGTTAGAACATGCTGCACCAAAACTTTGCACAAACTTAAGGACAATTACAATTGGAAGATCATAGATGTGACCATACCAGAGATAGAAGCAATGCGCCTGGCACATTATATAACAATCGGATCTGAGTGCTCCACTGCACTTGATTCTTTTAAAGAAAAAAATTTTGCAGAATTAGGATGGGATGTAAGGGTAGCACAAAGCATTTATGGTGCTTTCAGCGGCATGGAGTATCTTAAAGCTCAGAAAATGAGGAATCGACAACTGAAATTTCATAAGAAAATATTTGCTGAGGCGGATGTCATCGTCTCACCAACAACTGGTGTGACTGCATATCCAATTCAAGATGATGCTCTGAAGACTGGTGAACTTGACTACGTGAATGGAGCTGCACTTGTTCGTTATTCCATAGCAGGAAACTTTCTGGGACTTCCTGCTATCACTGTTCCTGTTGGATTCGATAGATTGGGTTTGCCAATTGGGCTCCAGTTTATTGGAAGGCCTTGGTCAGAAGCCACACTGATCCATTTGGCATTTGCAGTGCAGGCAATCTGCATCTCAGAGTCCAGAAAGCCAGAGCTTTTCTATGACCTTCTAAGGAGGAAGAACGGTAGCAATGGCATGCCGTCTGAAGCTAAATAA 1863 0.4364 MDFLNRKGVAYGPVKDVDLGPYSNEFYLQANVKAPRMTGLVVKIFTHLLECPIIGTFLLFILKGNNLIHRLITNAEFQEPPLFVPLHDFEDIKEREVKCLDSSLSPPEKVQHALDCLPISSEVTLDGANSSFCRWTIMDYAKAYRSGEITPSLVAERFIAAIDESTKPSLKMGFFTHYSVDDILRQAAESTHRHQRGEPISVLDGVPVAIKDEIDCLPYPTTGGTTWLHKERPCNDDACCVKRLRLCGAILVGKTNMHELGSGTSGINPHYGPARNPYDTSKIAGGSSSGSASLVSAGLCPVALGVDGGGSVRMPAALCGVVGLKPTFARIPHDGVLPLNWTVGMVGILAGTVEDALIVYAAISGEVPYQHTFSVLTNINLPRLSLTKSISDIRLAKYGKWFDDCSHDVRTCCTKTLHKLKDNYNWKIIDVTIPEIEAMRLAHYITIGSECSTALDSFKEKNFAELGWDVRVAQSIYGAFSGMEYLKAQKMRNRQLKFHKKIFAEADVIVSPTTGVTAYPIQDDALKTGELDYVNGAALVRYSIAGNFLGLPAITVPVGFDRLGLPIGLQFIGRPWSEATLIHLAFAVQAICISESRKPELFYDLLRRKNGSNGMPSEAK 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01919 620 SUPERFAMILY Amidase signature (AS) enzymes 131 591 IPR036928 -
Spst9g01919 620 PANTHER TRANSAMIDASE 129 605 IPR000120 GO:0003824
Spst9g01919 620 Pfam Amidase 175 581 IPR023631 -
Spst9g01919 620 Gene3D Amidase signature (AS) domain 136 592 IPR036928 -
Spst9g01919 620 ProSitePatterns Amidases signature. 285 316 IPR020556 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01919 Spst-Chr9 26965005 26970961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01919 16 606 Acyl Lipid Metabolism Gene Families AT5G64440 44.833 8.55e-170 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01919 - - gmx:100775876 1142.1