Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01918 ATGTCCCTCATCCCAAGCTTCTTTGGTGGTCGAAGGAGTAACGTTTTCGACCCTTTCTCCCTTGACGTATGGGACCCCTTCAAGGATTTTCACTTTCCATCTTCGATTTCTGCTGAAAATTCTGCATTTGTGAACACCCGAGTGGATTGGAAGGAGACCCCAGAAGCGCACGTGTTCAAAGCTGATATTCCAGGGCTGAAGAAGGAGCAAGTGAAGGTGGAGATTGAAGATGATAAGATTCTTCAGATAACCGGAGAGAGGAACGTTGAGAAAGAAGATAAGAACGATAAGTGGCATCGTGTTGAGCGTAGCAGTGGGAAGTTCTTGAGGAAGTTCAGGTTACCAGAGAATGCAAAAGTGGATCAAGTGAAGGCTTCCATCGAAAATGGGGTTCTCACTGTCACTGTTCCCAAGGAAGAGGTCAAGAAACCTGATGTTAAAGCAGTTCAAATTTCCGGTTAA 462 0.4545 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFHFPSSISAENSAFVNTRVDWKETPEAHVFKADIPGLKKEQVKVEIEDDKILQITGERNVEKEDKNDKWHRVERSSGKFLRKFRLPENAKVDQVKASIENGVLTVTVPKEEVKKPDVKAVQISG 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01918 153 SUPERFAMILY HSP20-like chaperones 16 153 IPR008978 -
Spst9g01918 153 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 14 152 IPR031107 -
Spst9g01918 153 Pfam Hsp20/alpha crystallin family 49 152 IPR002068 -
Spst9g01918 153 CDD ACD_ScHsp26_like 47 138 - -
Spst9g01918 153 Gene3D - 10 153 IPR008978 -
Spst9g01918 153 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 39 153 IPR002068 -
Spst9g01918 153 FunFam 17.6 kDa class I heat shock protein-like 10 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01918 Spst-Chr9 26956199 26956660 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01918 K13993 - gmx:100526893 277.33