Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01912 ATGGATTCCAAGATGAACTCAGGGAAGTTGGGATTGCTGCTTCTGCTACTCTTCCTCACCGCATCCACTTCTTCAGCCTGGTTCGGTAGTAAACACAGAAGTTCCGGTGCAAGTTCAAGCTCAAGTGGAAGGACCTCCTTCCGTTCCGATGAACCATCATCATCATCATCATCATCATCTTCACCATTCCTACTAAACCGGTTTCGATCTGGTTCATCCGTGGTTTTCCCAGTTCACGGCAACGTTTACCCTGTTGGGTTTTATAATGTCACTGTCAACATCGGGCAACCACCTAGGCCATATTTTCTCGATATTGACACAGGTAGCGACCTTACATGGCTTCAATGTGATGCCCCTTGTTCCCGTTGCTCTCAGACACCCCATCCACTTTATAGGCCCAGCAATGATTTAGTGCCATGCAGGCACGCCCTTTGTGCATCCTTGCACCACACAGATAACTACGACTGTGAAGTTCCACATCAATGTGACTATGAAGTTGAGTATGCAGATCATTACTCATCCCTTGGTGTACTTCTCCATGATGTCTACACTCTCAACTTTACAAATGGAGTCCAACTTAAAGTTCGTATGGCACTTGGATGCGGATATGATCAGATTTTTCCAGATCCTTCTCATCACCCGTTAGATGGAATGCTTGGCCTTGGCAGGGGAAAAACTAGCTTGACATCCCAGCTGAATAGTCAGGGTTTGGTGCGAAATGTGGTTGGACACTGTTTGAGTGCACAGGGAGGAGGTTATATCTTCTTTGGAGAAGTTTATGATTCTTCTAGACTAACTTGGACTCCAATGTCATCCAGAGATTACAAACACTACTCAGCAGCAGGGGCAGCTGGACTCCTTTTTGGAGGGAAGAAGACTGGGGTTGGAAATCTTCATGCTGTTTTTGACACTGGGAGTTCATACACCTACTTCAACTCTATTGCTTACCAAGCTGTAATATCTTTGCTGAGGAAGGAATCAGGTGGAAAGCCCCTAAAGGAAGCACATGGTGATCAAACACTCCCTCTCTGTTGGCATGGTAAAAGACCTTTCAAAAGCATATATGAAGTGAGAAAATACTTCAAGCCAATCACGCTTAGTTTCAGCAGCAATGGAAGAAGTAAAGCTCAGTTTGAAATCCCTCCCGAAGGATATCTAATAATATCTAACATGGGAAATGTTTGCTTGGGCATTCTAAACGGATCTGAAGTAGGGATGGGTGATCTGAACCTAATAGGAGACATATCCATGCTAGACAAAGTGATGGTATTTGACAACGACAAGCAGTTGATTGGTTGGACACCGGCAGATTGTGATCGGGTTGCAAAATCCAGAGATGTCAGCATTTGA 1350 0.4481 MDSKMNSGKLGLLLLLLFLTASTSSAWFGSKHRSSGASSSSSGRTSFRSDEPSSSSSSSSSPFLLNRFRSGSSVVFPVHGNVYPVGFYNVTVNIGQPPRPYFLDIDTGSDLTWLQCDAPCSRCSQTPHPLYRPSNDLVPCRHALCASLHHTDNYDCEVPHQCDYEVEYADHYSSLGVLLHDVYTLNFTNGVQLKVRMALGCGYDQIFPDPSHHPLDGMLGLGRGKTSLTSQLNSQGLVRNVVGHCLSAQGGGYIFFGEVYDSSRLTWTPMSSRDYKHYSAAGAAGLLFGGKKTGVGNLHAVFDTGSSYTYFNSIAYQAVISLLRKESGGKPLKEAHGDQTLPLCWHGKRPFKSIYEVRKYFKPITLSFSSNGRSKAQFEIPPEGYLIISNMGNVCLGILNGSEVGMGDLNLIGDISMLDKVMVFDNDKQLIGWTPADCDRVAKSRDVSI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01912 449 MobiDBLite consensus disorder prediction 28 62 - -
Spst9g01912 449 FunFam Aspartyl protease family protein 65 258 - -
Spst9g01912 449 ProSiteProfiles Peptidase family A1 domain profile. 88 434 IPR033121 -
Spst9g01912 449 Pfam Xylanase inhibitor N-terminal 88 257 IPR032861 -
Spst9g01912 449 FunFam Aspartic proteinase Asp1 isoform A 261 442 - -
Spst9g01912 449 SUPERFAMILY Acid proteases 80 441 IPR021109 -
Spst9g01912 449 PRINTS Pepsin (A1) aspartic protease family signature 300 311 IPR001461 GO:0004190|GO:0006508
Spst9g01912 449 PRINTS Pepsin (A1) aspartic protease family signature 94 114 IPR001461 GO:0004190|GO:0006508
Spst9g01912 449 PRINTS Pepsin (A1) aspartic protease family signature 410 425 IPR001461 GO:0004190|GO:0006508
Spst9g01912 449 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 300 311 IPR001969 GO:0004190|GO:0006508
Spst9g01912 449 Gene3D Acid Proteases 65 257 IPR021109 -
Spst9g01912 449 Pfam Xylanase inhibitor C-terminal 297 434 IPR032799 -
Spst9g01912 449 PANTHER ASPARTYL PROTEASES 14 432 IPR001461 GO:0004190|GO:0006508
Spst9g01912 449 Gene3D Acid Proteases 258 443 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01912 Spst-Chr9 26862158 26865966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01912 58 444 Miscellaneous Gene Families AT1G44130 52.041 9.92e-142 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01912 - - vum:124823021 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01912 9 26862158 26865966 Spst9g01912 9 26862158 26865966 ECH