Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01909 ATGGAGAAGTGGGTGGTTTTGGTGATGCTGCTGGTGTCATGGAAAATGAAGGGAGGTTCTGGTGCCAAAACTGAGGTAAGATACGATGGAAGGTCTCTCATCATTGATGGCCAGAGAAAAATTCTCTTCTCTGGTTCAATTCATTATCCTCGCAGCACTCCTCAGGAGTATGAGGTAACAGGCATTGATCAAGGACTTATGTGGCCAGATTTGATAGCGAAAGCAAAGGAAGGAGGAGTGGACGTGATTCAGACCTATGTGTTTTGGAATCTACACGAGCCTCAACCAGGAAAATGCATAGAACAGTATGATTTCAGTGGGAGATATGACCTGGTGGGATTCATAAAGGAAATTGAAGCTCAAGGGATGTATGTTTGCCTCAGGATTGGACCTTTCATAGAGAGTGAATGGACATATGGGGGTTTCCCTTTCTGGTTACATGATATCCCTGACATTGTCTACCGAACGGATAATGAGCCATTCAAGTTCTACATGCAAAATTTTACCACAAAAATTGTGAACATGATGAAAGCAGAGGGGTTATATGCTTCCCAAGGAGGTCCAATCATACTGTCACAGATTGAAAATGAATACCAAAACATCCAAAAGGCATTTGGCGCAGCAGGATCGCAGTATGTTCAATGGGCTGCAAAAATGGCAGTTGACCTTAACACTGGTGTTCCATGGATTATGTGCAAACAAACTGATGCTCCCGATCCTGTGGTTGTTAGGCTAATTCTGCCACATATTGTTAATGTGAATGATGTATATGGTGGACTGCCATACATAAGGTCTGCTGAAGATATAGCATTTCATGTCACCCTTTTTATTGCAAGAAATGGAAGCTATGTGAACTATTATATGTACCATGGAGGGACCAACTTTGGGAGAACAGGCTCTGCTTATGTTATAACAGCATATTATGATCAAGCCCCACTTGATGAATATGGTTTGCTCAGGCAACCCAAGTGGGGACATCTCAAGCAATTACATGCTGTAATAAAGTCATGCTCTACCACTCTACTACAAGGAGTGCAGAGGAACTTCTCTTTAGGTCAACTACAGGAAGGTTATGTCTTTGAAGAAGATAAAGGGGAATGTGTTGCATTCCTTATAAACAATGATAGAGAAAATAAGGTTGCTGTGCAATTCCGCAACAGATCATACGAATTGCTCCCCAAGTCCATAAGCATCTTACCAGATTGTGAAAATGTAAATACCACAAGCAACAGAAGGATCGTAAGTCCTAAACAAAACTTCAGCTCGGTGGATGTTTGGAAGCAATTCCAAGATGTCATTCCAAACTTCGATCATACCTCACTAAAATCAGATTCATTGCTTGAGCAAATGAACACAACCAAAGACGAATCGGATTACCTTTGGTATATTCTTAGCAAACCAACACTTAGTGTTCAGTCTGCTGCTCATGTTGCCCATGCTTTTGATTCAGGGGCATTTCTTGAAAGAAGGTTCGCTGGTTTAATCAGTGTGCAACTTCAGTGCAGCGAAGAAGAGTCTCTTAATTTGACCAATTCTTTGTGGGGTTATCAGGTTGGATTACAGGGGGAGCAAGTACAAGTATATAACGGACAAAATAGCAGTGATATTGAATGGAGTCAACTGGGGAATACTATGGAACAAACGCTCATTTGGTACAAGACTACATTTGACACACCAGAGGGAGATGGCCCTGTTGTCTTGGACCTTAGTTCAATGGGAAAAGGTGAGGCTTGGGTAAATGGACAAAGCATTGGTCGTTATTGGATCTTGTTTCACGATTCCAAAGGCCACCCTTCACAGTCACTGTATCATGTGCCTCGGTCTTTCCTTAAGGACTCTGGAAACGTTTTGGTTTTGGTGGAGGAAGGTGGTGGGAACCCTCTTGGTATCTCCTTGGACACTATGAACATGGTTTGGAAAACAGTGGTCAGGGTGTTGAGCAACACAGATATGGTGGATCCATTCACAGTGGTCTCGTGTGGCAATGTGAGCTACGATGGTCGCTCCCTCATCATCGATGGCCAACGCAAGCTTCTTATCTCTGCTTCCATTCATTACCCTCGAAGCGTTCCCGCGATGTGGCCTGGTCTTGTTCAAACAGCGAAGGAAGGAGGGGTAGATGTCATTGAAACCTACGTTTTCTGGAACGGTCATGAGCTTTCTCCAGGCAATTATTACTTTGGAGGAAGGTTTGATCTGGTCAAGTTTGCGAAGACTGTTCAGCAGGCCGGGATGTATTTGATTCTTCGAATAGGCCCATTTGTTGCTGCAGAATGGAATTTTGGTGGTGTGCCGGTGTGGCTGCATTATGTTCCAGGCACAGTATTCCGGACTTACAATCAGCCTTTTATGGATGATCATTATGGATTTGCATACGAACCACTATTTTTGGTAGCATTCCTTCAATGTGCTAGTCTACCTTGTCCTCTAAACATATCTGAACCAATGACTCCATTTTGCGTCTTCAAAATTTTGCAGATAGAAAACGAATATGGATCCTACGAAAACTTTTATAAAGAGGATGGTAAGAAATATGCCTTGTGGGCTGCAAAGATGGCTGTCTCTCAAAATATAGGTGTCCCTTGGATAATGTGCCAACAATGGGATGCTCCAGATCCTGTGATGATAACCAGGCTATTCACGACTCTTTTGCAGATTGATACATGCAATTCATTCTACTGTGACCAATTTAAACCTACTTCTCCAAATAGGCCCAAAATTTGGACCGAGAATTGGCCTGGATGGATAGAGGAGTTAAAACTTTTGCAAAAGTTTAAGACTTTCGGGGGCAGAGATCCTCACCGGCCAGCAGAAGATGTTGCATTTTCTGTTGCTCGTTTCTTCCAGAAAGGTGGAAGTGTACACAATTACTACATGTATCATGGAGGAACAAATTTTGGGCGAACAGCTGGTGGTCCATTCATTACTACAAGTTATGACTATGATGCCCCAATAGATGAGTATGGGTTACCTAGACTTCCAAAATGGGGACATCTTAAGGAACTTCATAGAGCTATCAAATTATGTGAGCATGTACTGCTTAATCGGAAAAATGTTAATGTCCCCCTTGGTCCTTCTGTGGAGGCTGATGTCTATACTGACTCATCAGGAGCATGTGCTGCCTTTATTTCTAATGTTGATGATAAAAATGATAGAACAGTGGAATTTCGAAATACATCATATCACTTGCCAGCTTGGTCAGTTAGCATTCTTCCTGATTGCAAGAATGTAGTGTACAACACAGCGAAGGTTACTTCCCAGACAAATGTAGTTGCAATGACTCCTGGAAGTTTGCGGCAATCGGATAAAGGTTTAAAATATTTGAAATGGGAGATTGTGAAGGAGAAGCCAGGAATTTGGGGGACAGCAGACTTTGTCAAAAAGGGTTTTGTCGATCTCATCAATACTACCAAAGATACCACTGACTACCTATGGCATACAACAAGTATATTTGTTGGCGAACACGAAGAGTTTTTGACAAACGGAAGCAAACCGGTTCTTCTAATTGAATCTACTGGTCATGCTCTCCATGCTTTTGTGAATCAGGAATATCAAGGTACTGGTACTGGAAATGGTACACATTCACCATTCACTTTTAAGAATCCCATCTCCCTCCGAGCAGGGAAAAATGAAATTGCTTTGTTGTGCTTGACAGTTGGCTTACAGACTGCTGGACCATTTTATGACTTTGTGGGGGCGGGACTTACAAGTGTGAAGATTAAGGGACTGAACAATGGGACAATAGACTTGTCTTCTTATGCCTGGACTTACAAGATTGGAGTGCAAGGAGAACATCTAAAGCTATACCAGGGAGATGGGTTGAATAATGCGAACTGGACATCTACTTCAGAACCACCAAAAATGCAGCCATTGACATGGTACAAGGCTATCGTGGATGCTCCACCTGGGGATGAACCAGTTGGATTGGATATGTTACATATGGGCAAAGGTCTAGCCTGGTTAAATGGAGAGGAAATAGGAAGATATTGGCCTAGGAGAAGTGAATTCAAGAGTGAAGACTGTGTGAAAGAATGCGATTACAGAGGCAAATTTAATCCCGACAAATGTGACACTGGTTGTGGAGAACCTACGCAGAGATGGTACCATGTTCCACGATCTTGGTTCAAGCCATCAGGAAATATTCTTGTTCTTTTTGAGGAGAAAGGTGGAGATCCAAATATGATTAGGTTTGTGAGACGTAAAATATCTGGAGCGTGTGCCCTTGTTGCTGAGGATTACCCCTCAGTCGGACTCCTTTCTCAGGATGAAGATAAAACACAGAATAACAAAAACATTCCTTTTGCTCGATTGACGTGCCCCAGTAACACTCATATATCTGCTGTGAAGTTTGCAAGCTTTGGAACTCCTTCTGGATCATGTGGATCTTATCTCAAGGGAGATTGCCATGATCCCAATTCTAGCATAGTTGTTGAGAAGGCGTGCCTAAACAAAAACGACTGTGTCATAAAATTAACTGAAGAGAATTTCAAAACCAACTTGTGTCCTGGTTTATCAAGGAAACTTGCTGTGGAAGCGGTTTGTAGTTGA 4548 0.4246 MEKWVVLVMLLVSWKMKGGSGAKTEVRYDGRSLIIDGQRKILFSGSIHYPRSTPQEYEVTGIDQGLMWPDLIAKAKEGGVDVIQTYVFWNLHEPQPGKCIEQYDFSGRYDLVGFIKEIEAQGMYVCLRIGPFIESEWTYGGFPFWLHDIPDIVYRTDNEPFKFYMQNFTTKIVNMMKAEGLYASQGGPIILSQIENEYQNIQKAFGAAGSQYVQWAAKMAVDLNTGVPWIMCKQTDAPDPVVVRLILPHIVNVNDVYGGLPYIRSAEDIAFHVTLFIARNGSYVNYYMYHGGTNFGRTGSAYVITAYYDQAPLDEYGLLRQPKWGHLKQLHAVIKSCSTTLLQGVQRNFSLGQLQEGYVFEEDKGECVAFLINNDRENKVAVQFRNRSYELLPKSISILPDCENVNTTSNRRIVSPKQNFSSVDVWKQFQDVIPNFDHTSLKSDSLLEQMNTTKDESDYLWYILSKPTLSVQSAAHVAHAFDSGAFLERRFAGLISVQLQCSEEESLNLTNSLWGYQVGLQGEQVQVYNGQNSSDIEWSQLGNTMEQTLIWYKTTFDTPEGDGPVVLDLSSMGKGEAWVNGQSIGRYWILFHDSKGHPSQSLYHVPRSFLKDSGNVLVLVEEGGGNPLGISLDTMNMVWKTVVRVLSNTDMVDPFTVVSCGNVSYDGRSLIIDGQRKLLISASIHYPRSVPAMWPGLVQTAKEGGVDVIETYVFWNGHELSPGNYYFGGRFDLVKFAKTVQQAGMYLILRIGPFVAAEWNFGGVPVWLHYVPGTVFRTYNQPFMDDHYGFAYEPLFLVAFLQCASLPCPLNISEPMTPFCVFKILQIENEYGSYENFYKEDGKKYALWAAKMAVSQNIGVPWIMCQQWDAPDPVMITRLFTTLLQIDTCNSFYCDQFKPTSPNRPKIWTENWPGWIEELKLLQKFKTFGGRDPHRPAEDVAFSVARFFQKGGSVHNYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLPRLPKWGHLKELHRAIKLCEHVLLNRKNVNVPLGPSVEADVYTDSSGACAAFISNVDDKNDRTVEFRNTSYHLPAWSVSILPDCKNVVYNTAKVTSQTNVVAMTPGSLRQSDKGLKYLKWEIVKEKPGIWGTADFVKKGFVDLINTTKDTTDYLWHTTSIFVGEHEEFLTNGSKPVLLIESTGHALHAFVNQEYQGTGTGNGTHSPFTFKNPISLRAGKNEIALLCLTVGLQTAGPFYDFVGAGLTSVKIKGLNNGTIDLSSYAWTYKIGVQGEHLKLYQGDGLNNANWTSTSEPPKMQPLTWYKAIVDAPPGDEPVGLDMLHMGKGLAWLNGEEIGRYWPRRSEFKSEDCVKECDYRGKFNPDKCDTGCGEPTQRWYHVPRSWFKPSGNILVLFEEKGGDPNMIRFVRRKISGACALVAEDYPSVGLLSQDEDKTQNNKNIPFARLTCPSNTHISAVKFASFGTPSGSCGSYLKGDCHDPNSSIVVEKACLNKNDCVIKLTEENFKTNLCPGLSRKLAVEAVCS 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01909 1515 PANTHER BETA-GALACTOSIDASE RELATED 658 1415 IPR001944 GO:0004553|GO:0005975
Spst9g01909 1515 SUPERFAMILY (Trans)glycosidases 24 337 IPR017853 -
Spst9g01909 1515 FunFam Beta-galactosidase 958 1086 - -
Spst9g01909 1515 SUPERFAMILY Galactose-binding domain-like 1255 1403 IPR008979 -
Spst9g01909 1515 FunFam Beta-galactosidase 1250 1341 - -
Spst9g01909 1515 Pfam Galactose binding lectin domain 1437 1514 IPR000922 GO:0030246
Spst9g01909 1515 Gene3D - 1261 1406 - -
Spst9g01909 1515 SUPERFAMILY (Trans)glycosidases 662 1010 IPR017853 -
Spst9g01909 1515 Pfam Beta-galactosidase jelly roll domain 545 620 IPR025300 -
Spst9g01909 1515 SUPERFAMILY Galactose-binding domain-like 1068 1220 IPR008979 -
Spst9g01909 1515 Gene3D Glycosidases 22 338 - -
Spst9g01909 1515 CDD Gal_Rha_Lectin_BGal 1433 1514 - -
Spst9g01909 1515 Gene3D - 1421 1515 IPR043159 -
Spst9g01909 1515 Gene3D Glycosidases 661 1009 - -
Spst9g01909 1515 Pfam Glycosyl hydrolases family 35 32 242 IPR031330 -
Spst9g01909 1515 Pfam Glycosyl hydrolases family 35 669 1005 IPR031330 -
Spst9g01909 1515 Pfam Glycosyl hydrolases family 35 255 332 IPR031330 -
Spst9g01909 1515 Pfam Beta-sandwich domain in beta galactosidase 1013 1084 IPR041392 -
Spst9g01909 1515 Pfam Beta-sandwich domain in beta galactosidase 341 405 IPR041392 -
Spst9g01909 1515 FunFam Beta-galactosidase 1426 1515 - -
Spst9g01909 1515 PRINTS Glycosyl hydrolase family 35 signature 673 690 IPR001944 GO:0004553|GO:0005975
Spst9g01909 1515 PRINTS Glycosyl hydrolase family 35 signature 749 768 IPR001944 GO:0004553|GO:0005975
Spst9g01909 1515 PRINTS Glycosyl hydrolase family 35 signature 953 968 IPR001944 GO:0004553|GO:0005975
Spst9g01909 1515 PRINTS Glycosyl hydrolase family 35 signature 1316 1332 IPR001944 GO:0004553|GO:0005975
Spst9g01909 1515 PRINTS Glycosyl hydrolase family 35 signature 1289 1303 IPR001944 GO:0004553|GO:0005975
Spst9g01909 1515 PRINTS Glycosyl hydrolase family 35 signature 694 712 IPR001944 GO:0004553|GO:0005975
Spst9g01909 1515 PRINTS Glycosyl hydrolase family 35 signature 973 989 IPR001944 GO:0004553|GO:0005975
Spst9g01909 1515 FunFam Beta-galactosidase 516 641 - -
Spst9g01909 1515 Gene3D - 508 644 - -
Spst9g01909 1515 ProSiteProfiles SUEL-type lectin domain profile. 1433 1515 IPR000922 GO:0030246
Spst9g01909 1515 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 186 198 IPR019801 GO:0004553|GO:0005975
Spst9g01909 1515 SUPERFAMILY Galactose-binding domain-like 513 644 IPR008979 -
Spst9g01909 1515 FunFam Beta-galactosidase 659 1009 - -
Spst9g01909 1515 FunFam Beta-galactosidase 22 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01909 Spst-Chr9 26801056 26821334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01909 5 633 Glycoside Hydrolase AT5G63810 40.811 4.04e-170 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01909 - - cqi:110735856 1981.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01909 9 26801056 26821334 Spst9g01909 9 26801056 26821334 ECH