Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01898 ATGGTAGAAAATGGTTCGAGAACAAACCTTAGCTGCCGTGGACGTTATGATATTGAGGATGACTCAATAGATGGGGCGCCTTTAAAAAGTGACCCTGAATGCTTCGATGATGATGGCCGTCTTAAACGAACAGGGAATGTTTGGACTACAAGCTCCCACATTATAACAGCTGTGGTAGGATCTGGGGTGCTCTCCTTAGCTTGGGCAATAGCTCAGATGGGTTGGATTGCTGGTCCTGCAGTGTTGATCTTATTCAGCATTGTGACTTTGTATACTTCATCCTTTCTAGCTGATTGTTATCGTACTGGTGATCCCATGTTCGGGAAGAGAAATTATACTTTCATGGACGCAGTTAGCACCATTCTTGGTGGGAACAGTGTTACGTTTTGTGGGATAGTTCAATACTTGAATCTTTTCGGAAGTGCAATAGGATACACAATTGCGGCTTCCCTTAGCATGATGGCAATTAAGAGGTCTCACTGTGTCCATTCCTCTGACGGAGAAAACCCATGTCATATTTCTAGTAACCCATATATGATCGGTTTTGGGGCAATCCAAATTTTCTTTTCTCAAATTCCAGATTTTCATAACATGTGGTGGCTCTCAATAGTGGCTGCAGTAATGTCTTTCACCTATTCCATAATTGGTCTCGTTCTAGGAATCGCCAAAATTACAGAAACGGGGACTTTCAAGGGAAGCCTCACTGGAATAAGCATTGGAACTGTGACAGAGGCCCAAAAAGTATGGGGTGTTTTTCAAGCTCTTGGTAACATAGCCTTCGCCTATTCATATTCCTTCGTTCTCCTTGAAATTCAGGATACAATCAAATCTCCACCATCCGAAGTAAAAATAATGAAAAAGGCTGCAAAGTTAAGTATTGCAGTGACCACAACATTTTATATGCTTTGTGGCTGCATGGGCTATGCTGCTTTTGGAGATTCAGCACCTGGGAACCTGCTTGCTGGATTTGGTTTCCATAAACTATATTGGCTTATAGATATTGCTAATGCTGCTATCGTAGTTCACCTTGTGGGAGCATACCAAGTGTATGCCCAACCCCTCTTTGCCTTTGTCGAGAAGGAGACAGCAAAAAGATGGCCCAAAATTGACCAGGGATTCAAAATTTCAATTCCTGGTTTGCAGCCCTACAATCAGAACATATTTAGCCTAGTCTGGAGGACAGTGTTTGTGATCATAACCACTGTTATATCAATGTTGCTTCCATTCTTCAACGACGTTTTGGGAGTGATTGGAGCATTGGGGTTTTGGCCTTTAACTGTCTACTTTCCTGTGGAGATGTATATATTGCAAATGAAGATTCCAAAATGGAGCATGAGATGGATTTCTCTACAATTGTTGAGTGCGGTCTGCCTCATTGTATCAATTGTGGCTGGTCTTGGCTCAGTGGTCGGTGTCTTGCTTGATCTCAAGAAATACAAACCATTCAGTTCTGATTATTAA 1461 0.4216 MVENGSRTNLSCRGRYDIEDDSIDGAPLKSDPECFDDDGRLKRTGNVWTTSSHIITAVVGSGVLSLAWAIAQMGWIAGPAVLILFSIVTLYTSSFLADCYRTGDPMFGKRNYTFMDAVSTILGGNSVTFCGIVQYLNLFGSAIGYTIAASLSMMAIKRSHCVHSSDGENPCHISSNPYMIGFGAIQIFFSQIPDFHNMWWLSIVAAVMSFTYSIIGLVLGIAKITETGTFKGSLTGISIGTVTEAQKVWGVFQALGNIAFAYSYSFVLLEIQDTIKSPPSEVKIMKKAAKLSIAVTTTFYMLCGCMGYAAFGDSAPGNLLAGFGFHKLYWLIDIANAAIVVHLVGAYQVYAQPLFAFVEKETAKRWPKIDQGFKISIPGLQPYNQNIFSLVWRTVFVIITTVISMLLPFFNDVLGVIGALGFWPLTVYFPVEMYILQMKIPKWSMRWISLQLLSAVCLIVSIVAGLGSVVGVLLDLKKYKPFSSDY 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01898 486 PANTHER OS05G0424000 PROTEIN-RELATED 46 470 - -
Spst9g01898 486 Pfam Transmembrane amino acid transporter protein 44 473 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01898 Spst-Chr9 25661552 25664488 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01898 22 486 Organic Solute Cotransporters AT5G09220 70.149 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01898 K24917 - gmx:100817699 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01898 9 25661552 25664488 Spst9g01898 9 25661552 25664488 ECH