Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01896 ATGAACGATTTCGATGGTCTTCTAACCACCGATTTCGGGTTCAAACCCCAAGGAAAATCGGCGCCAATGGCAGCAGCTAAAGCCTCTTCCAACAACTCTTCCTCTCTCAACTTCGATTTAGGTTCCCGATCCGCTCGAGCTTCCAATTCCTTCGCCGGCGGCGAATCCGTCAACGTCGCTTCCATCGACGATCTCTTCAGCGGTGGTGGCGGCGGCGGCAGCAAGCAGGAGGCGTCTTTCGACTTCGACTCCGTGTTTCGTGGCTCCGCCGATATGCGCTCCAAGTCCGTTAACCTGCCGGCGCACGATGAACCGGTCTTTGACAAACCGATGTATGACGACGACGACATTTTTGACGGTGTTCCTGGGCTCAAGAGCTCCTCCAAGTTCTCCTACGGCGACGTTTTCGCTCCTGCCGCGTTCGATGATCTTCTCGGCGGGTTAGGTAAATCGAAGTCGTCGGAGAAGGGAGAGAGAGGTGTCACGGATTTTGATGACTTGATCGCTGGATTCGGAAGCAGTAAGGCTTCCACTGATAGGACCGTTCCTAATATTGATTTATCATCAGAACCTACTATCAATTCTTCTAAAACAGCCTCCAGTGAGACAGATGACCCTTTCAAAGTGTTTGAATCAACTTCAGTCCCAATGGATTCATCCTCAAAATACTTTACAGACCCATTGGAAGAAATTAGTAAATTTAGTAGTTCTAGAAGCACAAAAAATGATAGCTTGTCAAATTCAAATGGTGAAGTATATGATGATATTGATCCCTTCGGTGGACTTGGAAATTCTGTACCTGCATTCTCAGCAGAGAGAGATAGCATGAACCACAGCAGCTCCTCAAATAAAACCAGAGATAAAGAATCAAATGGTGAATCATCTGTGAGAAATCATGAGAGACAAACACAAACTAAGATTCCTGTTGATCATGATAAAAAATTTTATCAGGCTGCATTTGAGATGCCTACATATTCATCTGACCCTTACAAATCAGTTGGCCGAAGGTCTACTTCCCCTTCACATGATAATGATGGTTTCCAGCAAGCTAATACCCAGGCAGATATGTCTCCGAAATATGAAGAAACGTTTGAATCAAATGATGATGTATGGCTGACAGTATCAGAGATTCCTCTTTTCACTCAGCCAACTGCTGCTCCACCACCTTCAAGACCTCCTCCTCCTCGACCAGTACATATACCCAAGGCAGTAGCAGGTTCATCTGCTTCTGGCAATGTCAGAAAGAAGGATACTGATTTTTCTTCTTTCCCAAGTTCCACTCAATTTTCTCAAGGTCCTAAATCGTCTCCTGCTGCAGCCAAATTATCTTCTGCATCTCAGTTTGATGAACTTGAAGATTTTGCCATGGGCAGGAGTCGTGGTAATGACAATGAACATGGAAATGGTTTTACTGATGAAGAATTAGAGATGAACTCAGCTGCTGCTGCTGCTATGAAAGAGGCTATGGATAAAGCTGAAGCTAGATTTAGGCATGCAAAGGAAGTTAGGGAGAGAGAAAATACAAAAGCTGTTAAAAGCAAGGAGCCTGTGCAATTGGAAAAGGATGGAGAAAAGCAGGAAAGGTTAGATCATGAACAACAGCAAAAGGAGAGAGAGGAAAAAGAGCAAAGAAGACGTGAGAAGGAAAGGGAAGATAAAGAAAGAGAGCAACAGAGACTTGAGAGGGAAAGAGAAATGGCTAGACAGGCTGTAGAAAGAGCTACTAGAGAAGCACGTGAAAGAGCAGCTGTGGAAGCTCGCCAAAGAGCTGAGAGGGCTGCTGTTGAGAAAGCTAATGCAGAAGCTAGAAAGCGTGCTGAAAGGGCCGCAGTTCAGAGGGCTCAAGCTGAAGCTCGTGAAAGGGCTGCTGCTGAGGCAAAGGAAAGGGCTGAAAAGGCTGCTGCTGAGGCAAAGGAGTGGGAAGTGCGGGAAAGGGCTGCAGCTGCAAGAGCTGAATCTGAAGCAAGAGGAAAACAAGAACGTGCTGCTGTTGAAAGGGCTGCTGCAGAGGCTCGAGAAAGAGCTGCAGCACAGGCACGAGAAAGAGCTGCAGCTGCTGCAAAGATGAACCAACAACAAAATGACAATGATCTTGAATCATTCTTCAGCACAGGTGCCCGAGCTAACAGTGCTCCAAGACCTCCTAGGCCTAGTGCTTCAGACCCTGTATTCGATGCCCAATTTTCGTCAGATGTGTCTTGGAAATCTTCAGGTGTAACTTCAAGCATGAAGAAAGCATCGTCATCTACTAATATTGTTGATGATCTTTCCTCAATTTTTGGAGCTGCTCCATCATCATCTGGAGTGTTTCAGGAAGTTGAAGGGGAAAGTGAAGAAAGACGAAAAGCCAGGTTGGAACGCCAGCAGAGGGCTCAGGAGCGTGCGGCTAAAGCATTGGCTGAGAAGAATCAACGGGACCTACAAACTCAACGAGACCAAGCTGAGAAACATAGGGTTGCTGAAACATTGGATTTTGAAATTAAGCGCTGGGCTGCAGGAAAAGAGGGGAACTTGCGTGCCTTGCTTTCCACCTTACAATATGTTCTGTGGCCTGAATGTGGTTGGCAACCAGTTTCTTTGACTGATTTGATTACAGCCGCAGCTGTCAGAAAGGTTTATAGGAAAGCAACATTGTGCATTCATCCTGATAAAGTACAACAGAAGGGTGCCACTATTCAGCAGAAATGTATTGCTGAGAAGGTTTTTGATCTACTCAAGGAGGCATGGAATAAGTTCAATTCAGAGGAGCTTTTCTAA 2757 0.4588 MNDFDGLLTTDFGFKPQGKSAPMAAAKASSNNSSSLNFDLGSRSARASNSFAGGESVNVASIDDLFSGGGGGGSKQEASFDFDSVFRGSADMRSKSVNLPAHDEPVFDKPMYDDDDIFDGVPGLKSSSKFSYGDVFAPAAFDDLLGGLGKSKSSEKGERGVTDFDDLIAGFGSSKASTDRTVPNIDLSSEPTINSSKTASSETDDPFKVFESTSVPMDSSSKYFTDPLEEISKFSSSRSTKNDSLSNSNGEVYDDIDPFGGLGNSVPAFSAERDSMNHSSSSNKTRDKESNGESSVRNHERQTQTKIPVDHDKKFYQAAFEMPTYSSDPYKSVGRRSTSPSHDNDGFQQANTQADMSPKYEETFESNDDVWLTVSEIPLFTQPTAAPPPSRPPPPRPVHIPKAVAGSSASGNVRKKDTDFSSFPSSTQFSQGPKSSPAAAKLSSASQFDELEDFAMGRSRGNDNEHGNGFTDEELEMNSAAAAAMKEAMDKAEARFRHAKEVRERENTKAVKSKEPVQLEKDGEKQERLDHEQQQKEREEKEQRRREKEREDKEREQQRLEREREMARQAVERATREARERAAVEARQRAERAAVEKANAEARKRAERAAVQRAQAEARERAAAEAKERAEKAAAEAKEWEVRERAAAARAESEARGKQERAAVERAAAEARERAAAQARERAAAAAKMNQQQNDNDLESFFSTGARANSAPRPPRPSASDPVFDAQFSSDVSWKSSGVTSSMKKASSSTNIVDDLSSIFGAAPSSSGVFQEVEGESEERRKARLERQQRAQERAAKALAEKNQRDLQTQRDQAEKHRVAETLDFEIKRWAAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAAAVRKVYRKATLCIHPDKVQQKGATIQQKCIAEKVFDLLKEAWNKFNSEELF 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01896 918 MobiDBLite consensus disorder prediction 687 707 - -
Spst9g01896 918 MobiDBLite consensus disorder prediction 230 251 - -
Spst9g01896 918 MobiDBLite consensus disorder prediction 488 679 - -
Spst9g01896 918 MobiDBLite consensus disorder prediction 382 400 - -
Spst9g01896 918 Coils Coil 482 509 - -
Spst9g01896 918 MobiDBLite consensus disorder prediction 330 360 - -
Spst9g01896 918 MobiDBLite consensus disorder prediction 16 36 - -
Spst9g01896 918 SUPERFAMILY Chaperone J-domain 754 916 IPR036869 -
Spst9g01896 918 Gene3D DnaJ domain 771 917 IPR036869 -
Spst9g01896 918 Coils Coil 661 696 - -
Spst9g01896 918 MobiDBLite consensus disorder prediction 773 815 - -
Spst9g01896 918 MobiDBLite consensus disorder prediction 172 368 - -
Spst9g01896 918 MobiDBLite consensus disorder prediction 411 443 - -
Spst9g01896 918 MobiDBLite consensus disorder prediction 767 815 - -
Spst9g01896 918 Coils Coil 775 817 - -
Spst9g01896 918 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 607 916 - -
Spst9g01896 918 Coils Coil 583 643 - -
Spst9g01896 918 MobiDBLite consensus disorder prediction 453 472 - -
Spst9g01896 918 MobiDBLite consensus disorder prediction 174 221 - -
Spst9g01896 918 MobiDBLite consensus disorder prediction 279 317 - -
Spst9g01896 918 Coils Coil 524 577 - -
Spst9g01896 918 FunFam Auxilin-related protein 1 788 917 - -
Spst9g01896 918 MobiDBLite consensus disorder prediction 381 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01896 Spst-Chr9 25638307 25650072 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01896 - - gmx:100814144 1040.41