Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01891 ATGGATTCAGCAGAGAAAAGGCTTAATGAGCTTGGCTACAAGCAAGAACTGAGAAGAGAAATGACTATGTTCAAAACTCTGGCAATATCATTTTCCACAATGACCCTTTTCACTGGAATTACACCTCTCTATGGTTCTAGTCTTCAATATGCAGGCCCCGCATCTCTTGTGTGGGGATGGGTAATGGTTTCTTTCTTCACTTGGTTCGTTGGGATTGCAATGGCTGAGATATGCTCCTCGTTCCCGACGACTGGTTCTCTGTACTTTTGGGCTGCCCATTTAGCTGGTCCAAAATGGGGACCATTTTCTTCATGGTGCTGTGCTTGGCTTGAGACCATTGGGCTTATAGCTGGGATAGGGACTCAGGCATATGCAGGATCACAAACATTGCAGAGTATAATCCTCCTCTCAACTGGCACAAACAAAGGTGGAGGGTACTTCGCCCCAAAATGGCTATTCTTATGTATGTACATTGGCCTCACTGTTATATGGGCGGCACTAAACACATTTGCATTGGAAGTGATTGCCTTGATTGATATAGTTTCAATATGGTGGCAGGTTATTGGTGGATTGGTGATAGTCATAATGTTACCTCTGGTAGCACTAACTACAAAATCTGCTTCATTTGTATTCACACACTTAGAATTAGCCCCTGGATCAACAGGAGTAACAAGCAAACCATATGCTGTTATCCTATCATTTCTTGTCAGCCAGTATTCCCTCTATGGCTATGATGCTGCAGCACATCTAACTGAAGAAACCAAAGGTGCAGACAAGAATGGGCCTATTGCAATACTAGGTAGCATTGGGATTATTTCAGTATTTGGATGGGCATATATCTTGGCACTTACATTCAGCATTCAGGATTTTGGCTACCTTTATGATGTAAACAATGAGACTGCTGGAGCTTTTGTTCCAGCACAAATACTCTATGATGCATTCCATGGAAGATATCACAATTCTGCTGGAGCAATCGTTCTACTATTTGTCATTTGGGGTTCATTCTTTTTTGGTGGGCTTTCAATTACTACAAGTGCTGCCAGAGTGGTTTATGCTTTGTCAAGAGACAAGGGAGTTCCTTTTTCCCACTTATGGCAACAACTGCACCCAAAGTACAAGGTTCCCTCAAATGCAGTGTGGCTTTGTGCAGCAATCTGCATTCTTCTTGGTCTCCCAATTTTGAAGGTCAATGTAGTCTTCACTGCAATAACTTCAATATGCACAATTGGATGGGTTGGTGGTTATGCAGTTCCTATCTTTGCAAGACTTGTGATGTCTGAGAAGAACTTCAAGCCTGGTCCATTTTATTTAGGCAAAGCAAGAAGACCAGTGTGTCTGGTGGCATTTCTATGGATTTGTTACACATGTTCTGTATTCCTTTTGCCAACTCTGTACCCAATTGCTTGGGATACTTTCAATTATGCACCAGTTGCTTTGGGGGTGGGTTTGGGCCTAATAATGCTTTGGTGGCTGTTAGATGCAAGGAAATGGTTCAAAGGGCCAGTTAGGAATATTGATATGCAAAATGGCAAGGTATAA 1539 0.4243 MDSAEKRLNELGYKQELRREMTMFKTLAISFSTMTLFTGITPLYGSSLQYAGPASLVWGWVMVSFFTWFVGIAMAEICSSFPTTGSLYFWAAHLAGPKWGPFSSWCCAWLETIGLIAGIGTQAYAGSQTLQSIILLSTGTNKGGGYFAPKWLFLCMYIGLTVIWAALNTFALEVIALIDIVSIWWQVIGGLVIVIMLPLVALTTKSASFVFTHLELAPGSTGVTSKPYAVILSFLVSQYSLYGYDAAAHLTEETKGADKNGPIAILGSIGIISVFGWAYILALTFSIQDFGYLYDVNNETAGAFVPAQILYDAFHGRYHNSAGAIVLLFVIWGSFFFGGLSITTSAARVVYALSRDKGVPFSHLWQQLHPKYKVPSNAVWLCAAICILLGLPILKVNVVFTAITSICTIGWVGGYAVPIFARLVMSEKNFKPGPFYLGKARRPVCLVAFLWICYTCSVFLLPTLYPIAWDTFNYAPVALGVGLGLIMLWWLLDARKWFKGPVRNIDMQNGKV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01891 512 Pfam Amino acid permease 23 481 IPR002293 GO:0016020|GO:0022857|GO:0055085
Spst9g01891 512 PIRSF AA_transporter 4 511 - -
Spst9g01891 512 Gene3D Amino acid/polyamine transporter I 16 500 - -
Spst9g01891 512 PANTHER AMINO-ACID PERMEASE BAT1 2 507 - -
Spst9g01891 512 ProSitePatterns Amino acid permeases signature. 51 82 IPR004840 GO:0006865|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01891 Spst-Chr9 25341731 25344789 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01891 70 505 Organic Solute Cotransporters AT2G01170 42.202 5.51e-106 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01891 - - gmx:100814670 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01891 9 25341731 25344789 Spst9g01891 9 25341731 25344789 ECH