Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01882 ATGGCCTCTATGATTGTGGTGGTGGCATGGTTGGATACTTTTGTCAATTTTGTGTTTCCACTGCTACAAAAGAAGCCGCTCAGCTCTGCTCTGGTGTGGAATGATTACTGCGTTATAAGGTACTCAAATGAGGACTTCTTTGGGAAAGCTTTGACATACCCAACATGGCATACTGTTGGAACAAAAAACGTATCTAACAAAAGACTCTCAAAATTTTCTGGTCAAGGTTCGGAGAAGTTCAATAATGAAGTAATGTTTATAGCTAAATTGAGGCATCGCAACCTTTTCATTCCAACTACATTAATCCTTGATTCAGGAGTAACCCGACCACCACCACTTTTGAGTGAAGCTGATTTGCTGAGTTGTATGGACAAGGAGGGTATTGGTACTGATGCTACAATGCATGATCACATCAAGAAGCTGCTTGATCGATTTTATGCAACTAAGGATGCCAACACTCGTTTCACACCAACTAATCTTTTCTGTTTAGAAGAGTTATTATACAAGGTTACTAGGTAG 519 0.3988 MASMIVVVAWLDTFVNFVFPLLQKKPLSSALVWNDYCVIRYSNEDFFGKALTYPTWHTVGTKNVSNKRLSKFSGQGSEKFNNEVMFIAKLRHRNLFIPTTLILDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDANTRFTPTNLFCLEELLYKVTR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01882 172 PANTHER PROKARYOTIC DNA TOPOISOMERASE 87 160 IPR000380 GO:0003677|GO:0003917|GO:0006265
Spst9g01882 172 Gene3D Phosphorylase Kinase; domain 1 40 95 - -
Spst9g01882 172 Gene3D Topoisomerase I, domain 2 96 162 IPR013824 -
Spst9g01882 172 SUPERFAMILY Prokaryotic type I DNA topoisomerase 78 160 IPR023405 -
Spst9g01882 172 Pfam DNA topoisomerase 87 160 IPR013497 GO:0003677|GO:0003916|GO:0006265
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01882 Spst-Chr9 24898550 24900709 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01882 64 95 Receptor kinase-like Gene Family AT4G23320 68.750 1.28e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01882 K03165 - csv:101209351 133.65