Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01839 ATGAATTCCTTTCGCGGATCCCAACATCGCACCAAACCTGCTCCAATTCCCCGCCAACATGCATCCTCCGACGACCAACAAATGCCTCCGCCCTCCACCCCACCAGCCTTCCGCTTCCGCTCCCTATCCACCTGCAGCTACAACCGTCCCTCCGCCTCCCGCGCCGTACAGCGATGCGCCTCAGCCCGCTTCACTCGCCAGCACACCACCTCACGCGGCGAGGTCATGCTCAATGACGTCGTCGGGAATGGCATCTCTGGCATCCTCCACAAGTGGGTGAACTACGGCCGTGGGTGGCGCCCCCGCTGGTTCGTCCTCCATGACGGCGTGCTCTCCTACTACAAGATCCATGGCGCCGACAAGCTCATCCTCAACCGTGACGTCGAGAATGGCTCCATGGTCATCGGCGAGGAGTCCCTCCGCCGCATCAACAGCCACCGCCACTGCCCCTCCCGCAATCGCAAACCCGTCAGCGAGATCCATATTATGGTGTGTTCGGTGCGAGAGAACACGACAGATAACAGGAGGTTTTCTGTGTGTACGGGGACGAAGAAGAGGCTGCACTTGAGGGCGGAGAGTAAGGAAGATAGAGCGACGTGGGTGGAGGCAATAATGGCAGTGAAGGACATGTATCCTCGCTTGCCCAATGCAGAAGTTATGTCACCCGTGGCATCAGTGGCTATTTCCACAAACAAGTTGAGAGAGAGGCTTGCAGAAGAGGGTGTGAGTGAAGCTACTATAAGGGAATGTGAGGAAATCATGAGATTCGAGTTCTCACAGTTGCAGAAGCAAATTGTTGTTCTCAAGCAGAAACATTTGCTACTAATGGAAACATCACGCCAGTTAGAGGCAGAGAAAGTTGATTTGGAGAACACACTTATCGAAGACCAAAGGCAATCAAAGCATGAAGCAGATTCCCATCCATCAATGCATGAAAAATATAGTGAGGGAAGTGGGGTTGATTCTTCTGATGAGCACGATGGGCTGGATCCCTCAGACGATGACGACGATGCATTCTTTGATACATGTGAAATTCTATCAACATGCCATGATTTTGAGCATGAGGAGACTAATCCAAATGGGAAATGTGATGAAAAGTCACCTATTGGATCTGTTGGATTTAACTATCCTCATATCAAGCGACGGAAGAAGTTGCCTGATCCTGTTGAAAAAGAGAGCAGCGTCAGTCTATGGTCAATCATAAAAGATAATATCGGGAAGGATCTTACAAAAGTTTGTCTTCCAGTTTACTTTAACGAGCCACTCTCCTCACTGCAGAAATGTTTTGAAGATGTTGAGTACTCTTACCTACTAGACCAAGCATACGAGTGGGGTAAAATGGGTAATGGTCTAATGAGGATGATACATGTAGCTGCATTTGCAGCTTCAGGGTATGCAAGCACCGAGGGTAGAGGTTGCAAACCATTTAATCCAATGTTGGGAGAGACATATGAAGCAGATTATCCAGACAAAGGCATTCGCTTTATCTCTGAGAAGATTGATCCTGTTGGTATATTGACCGTGGAATTTGATGACGGAGAAGTCGTTCGTTGGAGCAAGGTAACAACATCCATTTACAACCTCATTTTAGGAAAACTCTACTGCGACCATTATGGTACAATGCGCCTGGAGGGGAACAGGGACTATTTATGTGATGTATTGGTCAAAATGTGTCATATTTTCTCGTACTGTGAGGCGTGCCACTTGTGGCTTTTGGACAAAAAGGCTTTTCAAATTCACGGCATAGTGGAAGATAAGAAAGGTAAAACAGTGGCAAACATATTTGGGAAGTGGGATGAGAGTTTGCACTACGTAATTGGAGGGAGTTCTGGGAAAGGAAAAGGGTCCAATGAGTCATCAAAACCACATCTTTTGTGGAAGAGGAGTCCGGCACCAGAGCACCAGACAAGATATAACTTCACACAATTTGCTATTACACTGAATGAAATCACACCTGGACTAAAGGAGAAGCTGCCACCGACAGATTCAAGGCTAAGACCTGATCAAAGGTGTTTGGAGAATGGACAGCATGAAATGGCCAATGCTGAAAAGTTGAGGCTGGAACAAAGACAGCGGCAGGCACGAAAGATGCAAGAAAAGGGTTGGAAACCAAGGTGGTTTGCTAAGGAAAAAGGCAGCAACTCCTACCGTTATGTTGGAGGGTACTGGGAGACCAGGGAAAAGGGGAACTGGGAATCTTGTCCTGACATATTTGGCCAAGTCCCAACCGATGATTTTGATACCATAATTCAGTTTCTTGAGTTTGAGGCCACCTTGTGTCTTGGCCCAGAAATCATTGCAACAAAAATGGAAGATGATAGGTGA 2325 0.4774 MNSFRGSQHRTKPAPIPRQHASSDDQQMPPPSTPPAFRFRSLSTCSYNRPSASRAVQRCASARFTRQHTTSRGEVMLNDVVGNGISGILHKWVNYGRGWRPRWFVLHDGVLSYYKIHGADKLILNRDVENGSMVIGEESLRRINSHRHCPSRNRKPVSEIHIMVCSVRENTTDNRRFSVCTGTKKRLHLRAESKEDRATWVEAIMAVKDMYPRLPNAEVMSPVASVAISTNKLRERLAEEGVSEATIRECEEIMRFEFSQLQKQIVVLKQKHLLLMETSRQLEAEKVDLENTLIEDQRQSKHEADSHPSMHEKYSEGSGVDSSDEHDGLDPSDDDDDAFFDTCEILSTCHDFEHEETNPNGKCDEKSPIGSVGFNYPHIKRRKKLPDPVEKESSVSLWSIIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEDVEYSYLLDQAYEWGKMGNGLMRMIHVAAFAASGYASTEGRGCKPFNPMLGETYEADYPDKGIRFISEKIDPVGILTVEFDDGEVVRWSKVTTSIYNLILGKLYCDHYGTMRLEGNRDYLCDVLVKMCHIFSYCEACHLWLLDKKAFQIHGIVEDKKGKTVANIFGKWDESLHYVIGGSSGKGKGSNESSKPHLLWKRSPAPEHQTRYNFTQFAITLNEITPGLKEKLPPTDSRLRPDQRCLENGQHEMANAEKLRLEQRQRQARKMQEKGWKPRWFAKEKGSNSYRYVGGYWETREKGNWESCPDIFGQVPTDDFDTIIQFLEFEATLCLGPEIIATKMEDDR 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01839 774 ProSiteProfiles PH domain profile. 82 209 IPR001849 -
Spst9g01839 774 FunFam Oxysterol-binding protein-related protein 2A 669 740 - -
Spst9g01839 774 MobiDBLite consensus disorder prediction 293 326 - -
Spst9g01839 774 SMART PH_update 83 211 IPR001849 -
Spst9g01839 774 Coils Coil 279 299 - -
Spst9g01839 774 Gene3D - 83 211 IPR011993 -
Spst9g01839 774 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 84 500 IPR000648 GO:0008289
Spst9g01839 774 MobiDBLite consensus disorder prediction 293 334 - -
Spst9g01839 774 Pfam Oxysterol-binding protein 500 727 IPR000648 GO:0008289
Spst9g01839 774 Pfam Oxysterol-binding protein 396 500 IPR000648 GO:0008289
Spst9g01839 774 Pfam Pleckstrin homology domain 90 204 - -
Spst9g01839 774 Gene3D - 487 638 - -
Spst9g01839 774 SUPERFAMILY PH domain-like 85 218 - -
Spst9g01839 774 SUPERFAMILY Oxysterol-binding protein-like 391 750 IPR037239 -
Spst9g01839 774 Gene3D - 669 733 - -
Spst9g01839 774 Coils Coil 672 700 - -
Spst9g01839 774 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01839 Spst-Chr9 23396091 23406849 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01839 K20456 - gmx:100781218 1137.48